Miyakogusa Predicted Gene

Lj3g3v2477630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2477630.1 Non Chatacterized Hit- tr|Q3AX41|Q3AX41_SYNS9
Putative uncharacterized protein OS=Synechococcus sp. ,32.29,1e-18,no
description,FMN-binding split barrel; PPOX_FMN_cyano: PPOX class
probable FMN-dependent ,Pyridoxa,CUFF.44056.1
         (196 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g02580.1                                                       360   e-100
Glyma16g02580.2                                                       347   5e-96

>Glyma16g02580.1 
          Length = 196

 Score =  360 bits (924), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 172/196 (87%), Positives = 182/196 (92%)

Query: 1   MGSVPWKQLLLNALESNAHLKHSSYMQLATVGTNGKPSNRTVVFRGFQDNTDNIQINTDA 60
           MGS+ WKQLLLNALESNAHLKHSS+MQLAT+GTNG PSNRTVVFRGFQDNTDNIQINT A
Sbjct: 1   MGSLAWKQLLLNALESNAHLKHSSFMQLATLGTNGTPSNRTVVFRGFQDNTDNIQINTHA 60

Query: 61  RTRKIEGLKVCSSAEICWYFTDSWEQFRINGNVDIIDGSNPDPLKLQQREKSWFASSLRS 120
           RT KIE LK+CSSAEICWYFTDSWEQFRING+VDIIDG NPDPLKLQQREKSWFASSLRS
Sbjct: 61  RTPKIEELKLCSSAEICWYFTDSWEQFRINGDVDIIDGLNPDPLKLQQREKSWFASSLRS 120

Query: 121 RSQYMCPNPGLPCLNEQAQPEISLDPSTGPVDAFCLLILEPDGVDYLNLKNNQRLAFKSR 180
           R QY+ PNPGLPCLNEQA PEISLDPS GPVDAFCLLILEP+ VDYLNLK+NQRL FKS 
Sbjct: 121 RLQYLLPNPGLPCLNEQALPEISLDPSIGPVDAFCLLILEPNQVDYLNLKSNQRLTFKSS 180

Query: 181 VGDAAKKSWVMERVNP 196
           V DAAKKSW++ERVNP
Sbjct: 181 VSDAAKKSWIVERVNP 196


>Glyma16g02580.2 
          Length = 191

 Score =  347 bits (890), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 168/196 (85%), Positives = 178/196 (90%), Gaps = 5/196 (2%)

Query: 1   MGSVPWKQLLLNALESNAHLKHSSYMQLATVGTNGKPSNRTVVFRGFQDNTDNIQINTDA 60
           MGS+ WKQLLLNALESNAHLKHSS+MQLAT+GTNG PSNRTVVFRGFQDNTDNIQINT A
Sbjct: 1   MGSLAWKQLLLNALESNAHLKHSSFMQLATLGTNGTPSNRTVVFRGFQDNTDNIQINTHA 60

Query: 61  RTRKIEGLKVCSSAEICWYFTDSWEQFRINGNVDIIDGSNPDPLKLQQREKSWFASSLRS 120
           RT K+     CSSAEICWYFTDSWEQFRING+VDIIDG NPDPLKLQQREKSWFASSLRS
Sbjct: 61  RTPKL-----CSSAEICWYFTDSWEQFRINGDVDIIDGLNPDPLKLQQREKSWFASSLRS 115

Query: 121 RSQYMCPNPGLPCLNEQAQPEISLDPSTGPVDAFCLLILEPDGVDYLNLKNNQRLAFKSR 180
           R QY+ PNPGLPCLNEQA PEISLDPS GPVDAFCLLILEP+ VDYLNLK+NQRL FKS 
Sbjct: 116 RLQYLLPNPGLPCLNEQALPEISLDPSIGPVDAFCLLILEPNQVDYLNLKSNQRLTFKSS 175

Query: 181 VGDAAKKSWVMERVNP 196
           V DAAKKSW++ERVNP
Sbjct: 176 VSDAAKKSWIVERVNP 191