Miyakogusa Predicted Gene

Lj3g3v2402900.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2402900.2 tr|B9IB00|B9IB00_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_573172 PE=4
SV=1,60,6e-16,seg,NULL,CUFF.43971.2
         (224 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g06450.2                                                       228   3e-60
Glyma07g06450.1                                                       228   5e-60
Glyma16g03060.1                                                       226   2e-59
Glyma04g00310.1                                                       197   6e-51
Glyma06g00360.1                                                       195   2e-50
Glyma08g10620.1                                                       138   4e-33
Glyma08g10620.2                                                       138   4e-33
Glyma05g27630.1                                                       117   1e-26
Glyma06g00360.2                                                       112   2e-25
Glyma18g09580.1                                                        77   1e-14

>Glyma07g06450.2 
          Length = 191

 Score =  228 bits (582), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 107/116 (92%), Positives = 112/116 (96%)

Query: 1   MDPEVKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSVADTHYLHNVVGDTEVRK 60
           MDPE KKFGGGPRELTGAVDLISHFKLLPHYEFFCKR LPVS+ADTHYLHNVVGDTE+RK
Sbjct: 1   MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRSLPVSIADTHYLHNVVGDTEIRK 60

Query: 61  GDGMQLDQLIQNASSSRDTNARIQPFDLDVLKEAFQLRETAPVDLPAADKGIPTIA 116
           GDGMQL+QLIQN SS RDTNARIQPFDLDVLKEAFQLRETAP+DLPAA+KGIPTIA
Sbjct: 61  GDGMQLEQLIQNTSSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIA 116


>Glyma07g06450.1 
          Length = 223

 Score =  228 bits (580), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 107/116 (92%), Positives = 112/116 (96%)

Query: 1   MDPEVKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSVADTHYLHNVVGDTEVRK 60
           MDPE KKFGGGPRELTGAVDLISHFKLLPHYEFFCKR LPVS+ADTHYLHNVVGDTE+RK
Sbjct: 1   MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRSLPVSIADTHYLHNVVGDTEIRK 60

Query: 61  GDGMQLDQLIQNASSSRDTNARIQPFDLDVLKEAFQLRETAPVDLPAADKGIPTIA 116
           GDGMQL+QLIQN SS RDTNARIQPFDLDVLKEAFQLRETAP+DLPAA+KGIPTIA
Sbjct: 61  GDGMQLEQLIQNTSSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIA 116


>Glyma16g03060.1 
          Length = 222

 Score =  226 bits (575), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 108/116 (93%), Positives = 113/116 (97%), Gaps = 1/116 (0%)

Query: 1   MDPEVKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSVADTHYLHNVVGDTEVRK 60
           MDPE KKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVS+ADTHYLHNVVGDTE+RK
Sbjct: 1   MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSIADTHYLHNVVGDTEIRK 60

Query: 61  GDGMQLDQLIQNASSSRDTNARIQPFDLDVLKEAFQLRETAPVDLPAADKGIPTIA 116
           GDGMQLDQLIQN +S RDTNARIQPFDLDVLKEAFQLRETAP+DLPAA+KGIPTIA
Sbjct: 61  GDGMQLDQLIQN-TSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIA 115


>Glyma04g00310.1 
          Length = 220

 Score =  197 bits (502), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 88/116 (75%), Positives = 105/116 (90%)

Query: 1   MDPEVKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSVADTHYLHNVVGDTEVRK 60
           MDP+ KKFGGGPRELTG+VDL++HFKLLPH+EFFCKRPLPVS++D HYL+NVVGD E+RK
Sbjct: 1   MDPDSKKFGGGPRELTGSVDLLNHFKLLPHFEFFCKRPLPVSISDAHYLYNVVGDIEIRK 60

Query: 61  GDGMQLDQLIQNASSSRDTNARIQPFDLDVLKEAFQLRETAPVDLPAADKGIPTIA 116
           GDGMQLDQLIQ+ S S  +N RIQP DL++LKEAFQL+ET P+DLPAA+KGI T+A
Sbjct: 61  GDGMQLDQLIQDTSLSSGSNYRIQPLDLNILKEAFQLKETVPIDLPAAEKGILTVA 116


>Glyma06g00360.1 
          Length = 214

 Score =  195 bits (496), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 88/116 (75%), Positives = 104/116 (89%)

Query: 1   MDPEVKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSVADTHYLHNVVGDTEVRK 60
           MDP+ KKFGGGPRELTGAVDL++HF+LLPH+EFFCKRPLPVS++D HYL+NVVGD E+RK
Sbjct: 1   MDPDSKKFGGGPRELTGAVDLLNHFQLLPHFEFFCKRPLPVSISDAHYLYNVVGDIEIRK 60

Query: 61  GDGMQLDQLIQNASSSRDTNARIQPFDLDVLKEAFQLRETAPVDLPAADKGIPTIA 116
           GDGMQLDQLIQ+ S S  +N  IQP DLD+LKEAFQL+ET P+DLPAA+KGI T+A
Sbjct: 61  GDGMQLDQLIQDTSLSSGSNYHIQPLDLDILKEAFQLKETVPIDLPAAEKGILTVA 116


>Glyma08g10620.1 
          Length = 114

 Score =  138 bits (348), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 63/108 (58%), Positives = 83/108 (76%), Gaps = 1/108 (0%)

Query: 1   MDPEVKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSVADTHYLHNVVGDTEVRK 60
           MD E KKFG G +EL G  DLI+ ++L P+YEFFCK+ LPVS+++THYLHNVVGDT++RK
Sbjct: 1   MDLEGKKFGRGNKELGGTRDLINQYRLWPYYEFFCKKSLPVSISETHYLHNVVGDTKIRK 60

Query: 61  GDGMQLDQLIQNASSSRDTNARIQPFDLDVLKEAFQLRETAPVDLPAA 108
           G+GM+LDQL +N  +S +  A + PFDLDVL EAF +R+  PV L + 
Sbjct: 61  GEGMELDQLCKNTDTS-EKKACLCPFDLDVLSEAFHMRDMNPVHLSSV 107


>Glyma08g10620.2 
          Length = 108

 Score =  138 bits (348), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 63/108 (58%), Positives = 83/108 (76%), Gaps = 1/108 (0%)

Query: 1   MDPEVKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSVADTHYLHNVVGDTEVRK 60
           MD E KKFG G +EL G  DLI+ ++L P+YEFFCK+ LPVS+++THYLHNVVGDT++RK
Sbjct: 1   MDLEGKKFGRGNKELGGTRDLINQYRLWPYYEFFCKKSLPVSISETHYLHNVVGDTKIRK 60

Query: 61  GDGMQLDQLIQNASSSRDTNARIQPFDLDVLKEAFQLRETAPVDLPAA 108
           G+GM+LDQL +N  +S +  A + PFDLDVL EAF +R+  PV L + 
Sbjct: 61  GEGMELDQLCKNTDTS-EKKACLCPFDLDVLSEAFHMRDMNPVHLSST 107


>Glyma05g27630.1 
          Length = 186

 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 55/104 (52%), Positives = 74/104 (71%), Gaps = 3/104 (2%)

Query: 11  GPRELTGAVDLISHFKLLPHYEFFCKRPLPVSVADTHYLHNVVGDTEVRKGDGMQLDQLI 70
           G RE     DLI+  +L  +Y+FFCK+ LPVS+++THYLHNVVGDT++RKG+GM+LDQL 
Sbjct: 10  GNREFGSTRDLINQNRLWLYYKFFCKKSLPVSISETHYLHNVVGDTKIRKGEGMELDQLC 69

Query: 71  QNASSSRDTNARIQPFDLDVLKEAFQLRETAPVDLPAADKGIPT 114
           +N  +S      + PFDLDVL EAF +R+  PV L  + KG+P 
Sbjct: 70  KNMDTSEKKTC-MCPFDLDVLSEAFHMRDMNPVHL--SSKGLPN 110


>Glyma06g00360.2 
          Length = 180

 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/116 (51%), Positives = 70/116 (60%), Gaps = 34/116 (29%)

Query: 1   MDPEVKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSVADTHYLHNVVGDTEVRK 60
           MDP+ KKFGG                                  D HYL+NVVGD E+RK
Sbjct: 1   MDPDSKKFGG----------------------------------DAHYLYNVVGDIEIRK 26

Query: 61  GDGMQLDQLIQNASSSRDTNARIQPFDLDVLKEAFQLRETAPVDLPAADKGIPTIA 116
           GDGMQLDQLIQ+ S S  +N  IQP DLD+LKEAFQL+ET P+DLPAA+KGI T+A
Sbjct: 27  GDGMQLDQLIQDTSLSSGSNYHIQPLDLDILKEAFQLKETVPIDLPAAEKGILTVA 82


>Glyma18g09580.1 
          Length = 57

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/53 (64%), Positives = 40/53 (75%)

Query: 14 ELTGAVDLISHFKLLPHYEFFCKRPLPVSVADTHYLHNVVGDTEVRKGDGMQL 66
          E TG VDL++HFKLL H+EFFC   LPVS+ D  YLHNVV D E+RK DG+ L
Sbjct: 1  EFTGVVDLLNHFKLLLHFEFFCNSMLPVSIIDAQYLHNVVEDIEIRKIDGILL 53