Miyakogusa Predicted Gene
- Lj3g3v2401880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2401880.1 Non Chatacterized Hit- tr|D8RJG5|D8RJG5_SELML
Putative uncharacterized protein OS=Selaginella moelle,32.69,1e-17,no
description,Armadillo-like helical; RIX1,NULL,CUFF.43989.1
(185 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g06460.2 220 7e-58
Glyma16g03070.1 219 2e-57
Glyma07g06460.1 214 5e-56
>Glyma07g06460.2
Length = 276
Score = 220 bits (560), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 137/188 (72%), Gaps = 12/188 (6%)
Query: 1 MAAFDHFGGMDDVELKPRLLRTLISDHLRDKKRPSFNPSALSKVISLIRTHSLLSESFTE 60
MAAFDHFG M DV KPRLL+TLI DHL D+KRP NPS LSKV+SLI+THSLLSESF +
Sbjct: 1 MAAFDHFGNMYDVAFKPRLLQTLIRDHLPDEKRPFSNPSELSKVVSLIKTHSLLSESFAD 60
Query: 61 SMAPELVEEWKSAVTSWVERIETLLESSTLDKCWAGISLLGVTCELCSDDRFVDSYSSWF 120
S P+L+E WKSA+ SW+ I +LL ++ DKCWAGISLLGVTCE CS +RF++SYS WF
Sbjct: 61 STRPKLIEAWKSALASWLNLIYSLLSTTMPDKCWAGISLLGVTCEECSSERFLESYSVWF 120
Query: 121 DKLKKKLQPPADSDLVRVACCASISDLFARLSGFPKLKKD---CVVKVVQPVLRMLQDDN 177
KL LQ A C S+ L RL G+PK+KKD C VKVVQP L++L D+N
Sbjct: 121 QKLLSFLQLAA-------TCTNSL--LQNRLGGYPKIKKDSSSCAVKVVQPTLKILNDEN 171
Query: 178 SEAILEAA 185
SEAI +AA
Sbjct: 172 SEAIWDAA 179
>Glyma16g03070.1
Length = 842
Score = 219 bits (557), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 137/188 (72%), Gaps = 12/188 (6%)
Query: 1 MAAFDHFGGMDDVELKPRLLRTLISDHLRDKKRPSFNPSALSKVISLIRTHSLLSESFTE 60
MAAFDHFG M DV KPRLL+TLI DHL D+KRP NPS LSKV+SLI+THSLLSESF +
Sbjct: 1 MAAFDHFGNMYDVAFKPRLLQTLIRDHLPDEKRPFSNPSELSKVVSLIKTHSLLSESFAD 60
Query: 61 SMAPELVEEWKSAVTSWVERIETLLESSTLDKCWAGISLLGVTCELCSDDRFVDSYSSWF 120
S P+L+E KSA+TSW+ RI +LL ++ DKC AGISLLGVTCE CS +RF++SYS WF
Sbjct: 61 STRPKLIEASKSALTSWLNRIYSLLSTTMPDKCLAGISLLGVTCEECSSERFLESYSVWF 120
Query: 121 DKLKKKLQPPADSDLVRVACCASISDLFARLSGFPKLKKD---CVVKVVQPVLRMLQDDN 177
KL LQ +A + S L RL G+PK+KKD C VKVVQP L+ML D+N
Sbjct: 121 QKLLSFLQ---------LAATCTNSLLQNRLGGYPKIKKDSSSCAVKVVQPTLKMLNDEN 171
Query: 178 SEAILEAA 185
SEAI +AA
Sbjct: 172 SEAIWDAA 179
>Glyma07g06460.1
Length = 1038
Score = 214 bits (544), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 104/150 (69%), Positives = 120/150 (80%)
Query: 1 MAAFDHFGGMDDVELKPRLLRTLISDHLRDKKRPSFNPSALSKVISLIRTHSLLSESFTE 60
MAAFDHFG M DV KPRLL+TLI DHL D+KRP NPS LSKV+SLI+THSLLSESF +
Sbjct: 1 MAAFDHFGNMYDVAFKPRLLQTLIRDHLPDEKRPFSNPSELSKVVSLIKTHSLLSESFAD 60
Query: 61 SMAPELVEEWKSAVTSWVERIETLLESSTLDKCWAGISLLGVTCELCSDDRFVDSYSSWF 120
S P+L+E WKSA+ SW+ I +LL ++ DKCWAGISLLGVTCE CS +RF++SYS WF
Sbjct: 61 STRPKLIEAWKSALASWLNLIYSLLSTTMPDKCWAGISLLGVTCEECSSERFLESYSVWF 120
Query: 121 DKLKKKLQPPADSDLVRVACCASISDLFAR 150
KL LQ PADS LVRVA CAS+SDLFAR
Sbjct: 121 QKLLSFLQSPADSHLVRVAACASMSDLFAR 150
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Query: 136 VRVACCASISDLFARLSGFPKLKKD---CVVKVVQPVLRMLQDDNSEAILEAA 185
+ +A + S L RL G+PK+KKD C VKVVQP L++L D+NSEAI +AA
Sbjct: 240 LELAATCTNSLLQNRLGGYPKIKKDSSSCAVKVVQPTLKILNDENSEAIWDAA 292