Miyakogusa Predicted Gene

Lj3g3v2400840.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2400840.1 tr|A9T9H6|A9T9H6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_168781,26.19,1e-17,seg,NULL,CUFF.43985.1
         (422 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g06460.1                                                       409   e-114
Glyma16g03070.1                                                       348   8e-96

>Glyma07g06460.1 
          Length = 1038

 Score =  409 bits (1051), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/448 (50%), Positives = 281/448 (62%), Gaps = 29/448 (6%)

Query: 1    MGVGIAMYLEQEVVNNAIADLSTIKNKNSVTLNGSNSDVSVRVPPPTNHRKRKHSSNAGS 60
            MGVG+A+YL QEV+NNA ADLS I++KNS  LNGSNS+ S        HRKRKHSS  GS
Sbjct: 594  MGVGMALYLAQEVINNAFADLSIIEHKNSGILNGSNSNASAGALLLPIHRKRKHSSTTGS 653

Query: 61   LQEHVESVGLGVKDPKNRPLTPISLRIXXXXXXXXXXXXXXXXRSERWRQKVDSLLMDIA 120
            LQEH E  GL V+ PKNRPLTP+SLRI                +SE WR KVDSLL+  A
Sbjct: 654  LQEHGEG-GLSVEVPKNRPLTPVSLRIAALETLESLITVAGALKSEPWRSKVDSLLLVTA 712

Query: 121  NDSFKEGPSSEEISVLQQKDPXXXXXXXXXXXXXXXXXXXXXXXXVRPPYISQGLGLFRR 180
             DSFKEG  SEE SV QQK+P                        VRPPY++QGL LFRR
Sbjct: 713  MDSFKEGSVSEERSVFQQKEPAATTTELQLAALRALLVSLLSFARVRPPYLAQGLELFRR 772

Query: 181  GRQQTGTKLAEFCAHALLTLEVLIHPRALPLLNYDCAINN---EAQRNFQDEYTSWNSGG 237
            GRQQTGTKLAEFCAHALLTLEVLIHPRALP+++Y  A N+   EA  N Q  Y  W+   
Sbjct: 773  GRQQTGTKLAEFCAHALLTLEVLIHPRALPMVDYAYANNSSFGEAHSNLQHGYFGWSHNT 832

Query: 238  AFGLPQTAPPDYEDNLYASWLGNGNNEADMSLAKEAEHTKRPSEACRDNDPKVLSANLSS 297
             +GLPQ  PPDY+D+L A WL N +NE   SL K  ++T+ PSEACR +DP+VL  ++SS
Sbjct: 833  PYGLPQV-PPDYDDDLCARWLEN-DNEVGESLDKNTKYTQEPSEACRASDPEVLFVHVSS 890

Query: 298  DTIIQERSEMAPETATGKDVEMRTEEGAFSFMSGQPGDSTVLFKEPVSCTTSIPDIDAHF 357
            DT IQER EM  ETAT  DVEM+T E   +F S QPG+S V F+E VSCTT+IP ++   
Sbjct: 891  DTNIQERIEMVSETATCADVEMKTVEDETNFKSDQPGESVVQFQETVSCTTNIPVVETRG 950

Query: 358  GAVATEISERVVSDSAMPDRNSSLI-----------------------GTSDSKRTREFA 394
                 ++SE++VSD+++P   +S +                        TS S    EFA
Sbjct: 951  DVADDKVSEKIVSDNSIPHNEASHMESRHGSSVNKDFKFSSPSSSLWHRTSGSNIFEEFA 1010

Query: 395  FKLDYGSSEAEDDPFPAIVDADPDTDSE 422
            F+L++  + A++D FP IVD DPD+D+E
Sbjct: 1011 FQLEHDKALADEDDFPDIVDGDPDSDTE 1038


>Glyma16g03070.1 
          Length = 842

 Score =  348 bits (892), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 212/436 (48%), Positives = 261/436 (59%), Gaps = 37/436 (8%)

Query: 1   MGVGIAMYLEQEVVNNAIADLSTIKNKNSVTLNGSNSDVSVRVPPPTNHRKRKHSSNAGS 60
           MGVG+A+YL QEV+NNA ADLS+I++KN   LNGS S+ S     P +HRKRKHSS  GS
Sbjct: 430 MGVGLALYLAQEVINNAFADLSSIEHKNGGILNGSYSNASAGTLLPPSHRKRKHSSTTGS 489

Query: 61  LQEHVESVGLGVKDPKNRPLTPISLRIXXXXXXXXXXXXXXXXRSERWRQKVDSLLMDIA 120
           LQEH E  GL V+ PKNRPL P+SLRI                +SE WR KVDSLL+  A
Sbjct: 490 LQEHGEG-GLSVEVPKNRPLIPMSLRIAALETLESLITVAGALKSEPWRSKVDSLLIVTA 548

Query: 121 NDSFKEGPSSEEISVLQQKDPXXXXXXXXXXXXXXXXXXXXXXXXVRPPYISQGLGLFRR 180
            DSFKEG   EE SV QQK+P                        VRPPY++QGL LFR+
Sbjct: 549 MDSFKEGSVGEERSVFQQKEPAATTTDLQLAALRALLVSFLSFARVRPPYLAQGLELFRK 608

Query: 181 GRQQTGTKLAEFCAHALLTLEVLIHPRALPLLNYDCAINN---EAQRNFQDEYTSWNSGG 237
           GRQQTGTKLAEFCAHALLTLEVLIHPRALP+++Y  A N+   EA  N Q EY  W++  
Sbjct: 609 GRQQTGTKLAEFCAHALLTLEVLIHPRALPMVDYAYANNSSFGEAHSNLQHEYFGWSNST 668

Query: 238 AFGLPQTAPPDYEDNLYASWLGNGNNEADMSLAKEAEHTKRPSEACRDNDPKVLSANLSS 297
            +GLPQ  P   +D+L A WL NG NEAD SL K  ++T+ PSEACR +DP+VLS ++SS
Sbjct: 669 PYGLPQDPPDY-DDDLCARWLENG-NEADESLDKNTKYTQEPSEACRASDPEVLSMHVSS 726

Query: 298 DTIIQERSEM-APETATGKDVEMRTEEGAFSFMSGQPGDSTVLFKEPVSCTTSIPDIDAH 356
            T IQER+EM   ETAT  +VEM+T                    E VSCTT+I   +  
Sbjct: 727 GTNIQERTEMVVSETATCANVEMKT--------------------ETVSCTTNILVAETR 766

Query: 357 FGAVA-TEISERVVSDSAMPDRNSSLIGTSDSKRTR---------EFAFKLDYGSSEAED 406
             +V   E S +     +  +++      S S   R         EFAF+LD+  + A++
Sbjct: 767 NSSVTRNEASHKESGQGSSANKDFKFASLSGSLWHRTSGCKNIFEEFAFQLDHDKALADE 826

Query: 407 DPFPAIVDADPDTDSE 422
           D FP IVD DPD+DSE
Sbjct: 827 DDFPDIVDGDPDSDSE 842