Miyakogusa Predicted Gene
- Lj3g3v2389770.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2389770.1 Non Chatacterized Hit- tr|A8MR59|A8MR59_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At2,72.13,2e-18,DUF2996,Protein of unknown function DUF2996;
seg,NULL,CUFF.43957.1
(213 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma16g03140.1 266 1e-71
Glyma07g06550.1 260 6e-70
Glyma16g03140.2 169 3e-42
>Glyma16g03140.1
Length = 213
Score = 266 bits (680), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 147/214 (68%), Gaps = 2/214 (0%)
Query: 1 MQMAISLRGGALGDPSFRLCSLNSTSSLHXXXXXXXXXXXXXXXXXXLIACKIKTASRSK 60
MQMAI LRGGALGD SFRLCSL STSSLH LIA K KTASR++
Sbjct: 1 MQMAILLRGGALGDSSFRLCSLTSTSSLHVSQNVAIPTSSSSPILP-LIASKFKTASRNR 59
Query: 61 IICSAVQXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPQMMEEDVIPSLKE 119
I CSAVQ LPQMMEEDVIPSLK
Sbjct: 60 ITCSAVQESSPSTAATTAETKEEVKEAPKAAAPAKKPPAKAPAKPLPQMMEEDVIPSLKA 119
Query: 120 IFEAQEDLSDIELVFQDNKLEGSFLKKGNPYLFWAFFPTGNLTGPKGFSISSYNSGASTV 179
IFEAQED S+IELVF+DNKLEGSFLKKGNPY FWAFFPTGNL GPKGFS+SSYNS ASTV
Sbjct: 120 IFEAQEDFSNIELVFKDNKLEGSFLKKGNPYSFWAFFPTGNLIGPKGFSLSSYNSRASTV 179
Query: 180 EPFLVDEKKITAKHIVFWVEKRLAAQGIIPVWKD 213
EPFLVDEKKITA+HI+FWVEKRLAAQGIIPVWKD
Sbjct: 180 EPFLVDEKKITARHIIFWVEKRLAAQGIIPVWKD 213
>Glyma07g06550.1
Length = 214
Score = 260 bits (665), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 137/215 (63%), Positives = 146/215 (67%), Gaps = 3/215 (1%)
Query: 1 MQMAISLRGGALGDPSFRLCSLNSTSSLHXXXXXX--XXXXXXXXXXXXLIACKIKTASR 58
MQMAI LRGGALGD SFRLCSL STSSLH LIA K KT SR
Sbjct: 1 MQMAILLRGGALGDSSFRLCSLTSTSSLHVSQNVAIPTSSSSSSSLVLPLIASKFKTVSR 60
Query: 59 SKIICSAVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPQMMEEDVIPSLK 118
+I CSAVQ LPQMMEEDVIPSLK
Sbjct: 61 IRITCSAVQESSPSTAATAETKEEVKEAPKAEPAKKPPAKAPAKP-LPQMMEEDVIPSLK 119
Query: 119 EIFEAQEDLSDIELVFQDNKLEGSFLKKGNPYLFWAFFPTGNLTGPKGFSISSYNSGAST 178
IFEAQED S+IELVF+DNKLEGSFLKKGNPY FWAFFPTGNL GPKGFS+SSYNSGAST
Sbjct: 120 SIFEAQEDFSNIELVFKDNKLEGSFLKKGNPYSFWAFFPTGNLIGPKGFSLSSYNSGAST 179
Query: 179 VEPFLVDEKKITAKHIVFWVEKRLAAQGIIPVWKD 213
VEPFL+DEKKITA+HI+FWV+KRLAAQGIIPVW+D
Sbjct: 180 VEPFLIDEKKITARHIIFWVKKRLAAQGIIPVWED 214
>Glyma16g03140.2
Length = 168
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/164 (57%), Positives = 98/164 (59%), Gaps = 2/164 (1%)
Query: 1 MQMAISLRGGALGDPSFRLCSLNSTSSLHXXXXXXXXXXXXXXXXXXLIACKIKTASRSK 60
MQMAI LRGGALGD SFRLCSL STSSLH LIA K KTASR++
Sbjct: 1 MQMAILLRGGALGDSSFRLCSLTSTSSLHVSQNVAIPTSSSSPILP-LIASKFKTASRNR 59
Query: 61 IICSAVQXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPQMMEEDVIPSLKE 119
I CSAVQ LPQMMEEDVIPSLK
Sbjct: 60 ITCSAVQESSPSTAATTAETKEEVKEAPKAAAPAKKPPAKAPAKPLPQMMEEDVIPSLKA 119
Query: 120 IFEAQEDLSDIELVFQDNKLEGSFLKKGNPYLFWAFFPTGNLTG 163
IFEAQED S+IELVF+DNKLEGSFLKKGNPY FWAFFPTGNL G
Sbjct: 120 IFEAQEDFSNIELVFKDNKLEGSFLKKGNPYSFWAFFPTGNLIG 163