Miyakogusa Predicted Gene

Lj3g3v2387580.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2387580.1 Non Chatacterized Hit- tr|J3L5J0|J3L5J0_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB01G4,52.13,4e-19,
,CUFF.43951.1
         (120 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g03370.1                                                       121   2e-28
Glyma14g23830.1                                                       111   1e-25
Glyma06g11880.1                                                        95   2e-20
Glyma08g00570.1                                                        85   2e-17
Glyma05g32940.1                                                        81   2e-16
Glyma04g42880.1                                                        54   4e-08

>Glyma13g03370.1 
          Length = 158

 Score =  121 bits (303), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/128 (56%), Positives = 86/128 (67%), Gaps = 11/128 (8%)

Query: 2   SQADVSYCCGSCGYPLNLTSSNRITSNIASEYKRSVKKGSISFASVDLSRFTQVDEISCF 61
           SQ DV Y CG+CGY LNL+SSNR T++I S+Y +S+K+G ISF S+DLSRFTQVDEI C 
Sbjct: 20  SQRDVRYSCGTCGYELNLSSSNRNTASIGSKYGKSIKRGIISFFSIDLSRFTQVDEIQCV 79

Query: 62  P----VSW-FNSSKTKLLCRKCGVHIG---YGYCRESPALC-GLEPSVSSS--SQGKFII 110
           P     SW     +TKLLCRKCG HIG    GY    P +  G E S SS   S  K+ I
Sbjct: 80  PHFDKHSWGLFRRRTKLLCRKCGNHIGNAYNGYTSSFPLVTDGAESSPSSKVVSHTKYDI 139

Query: 111 KIRSLQPS 118
           +IR+LQPS
Sbjct: 140 RIRALQPS 147


>Glyma14g23830.1 
          Length = 178

 Score =  111 bits (278), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/125 (55%), Positives = 83/125 (66%), Gaps = 11/125 (8%)

Query: 5   DVSYCCGSCGYPLNLTSSNRITSNIASEYKRSVKKGSISFASVDLSRFTQVDEISCFP-- 62
           DV Y CG+CGY LNL+SSNR T++I S+Y +S+K+G ISF S+DLSRFTQVDEI C P  
Sbjct: 43  DVCYSCGTCGYELNLSSSNRNTASIGSKYGKSIKRGIISFFSIDLSRFTQVDEIQCVPHF 102

Query: 63  --VSW-FNSSKTKLLCRKCGVHIG---YGYCRESPALC-GLEPSVSSS--SQGKFIIKIR 113
              SW     +TKLLCRKCG HIG    GY    P +  G E S SS   S  K+ I+I 
Sbjct: 103 DKHSWGLFRRRTKLLCRKCGNHIGNAYNGYTSSFPLVSDGAESSPSSKVVSHTKYDIRIC 162

Query: 114 SLQPS 118
           +LQPS
Sbjct: 163 ALQPS 167


>Glyma06g11880.1 
          Length = 168

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/130 (50%), Positives = 80/130 (61%), Gaps = 14/130 (10%)

Query: 3   QADVSYCCGSCGYPLNLTSSNRITSNIASEYKRSVKKGSISFASVDLSRFTQVDEISCFP 62
           Q DV Y CG+CGY LNL+SSNR  S+I S+Y +S+K+G ISF +VD SRFT+ DEI   P
Sbjct: 28  QRDVCYSCGTCGYELNLSSSNRNISSIGSKYGKSIKRGIISFLNVDDSRFTRADEIEFAP 87

Query: 63  V----SW-FNSSKTKLLCRKCGVHIGYGYCRESPALCGL-----EPS----VSSSSQGKF 108
                 W     KTKLLCRKC  HIGY Y   + +         EPS     S+SS  K+
Sbjct: 88  YFSKHKWGLFRRKTKLLCRKCCNHIGYAYNDRTSSFFPFVSNRTEPSPPTEASNSSPMKY 147

Query: 109 IIKIRSLQPS 118
            I+IR+LQPS
Sbjct: 148 DIRIRALQPS 157


>Glyma08g00570.1 
          Length = 161

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 74/119 (62%), Gaps = 12/119 (10%)

Query: 5   DVSYCCGSCGYPLNLTSSNRITSNIASEYKRSVKKGSISFASVDLSRFTQVDEISCFPVS 64
           DV+Y CGSCGY LNL SSNR T ++     +S+K+G ISF SVD SRFTQ+ ++  +P S
Sbjct: 25  DVNYSCGSCGYELNLNSSNRNTCSLIDS--KSIKRGIISFFSVDESRFTQIQQLH-WP-S 80

Query: 65  W---FNS--SKTKLLCRKCGVHIGYGYCRESPALCGLEPSVSSSSQGKFIIKIRSLQPS 118
           W   FNS   +TKL CR CG H+GY Y    P+       +S  S+  + IK+ +L PS
Sbjct: 81  WMPFFNSKRQRTKLFCRSCGNHLGYAYTL--PSQSQSWDGISDDSR-IYDIKLTALLPS 136


>Glyma05g32940.1 
          Length = 128

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/113 (46%), Positives = 69/113 (61%), Gaps = 12/113 (10%)

Query: 10  CGSCGYPLNLTSSNRITSNIASEYKRSVKKGSISFASVDLSRFTQVDEISCFP--VSWFN 67
           C SCGY LNL SSNR T ++     +S+K+G ISF SVD SRFTQ+ ++  +P  + +FN
Sbjct: 12  CSSCGYELNLNSSNRNTCSLIDS--KSIKRGIISFFSVDESRFTQIQQLH-WPSWIPFFN 68

Query: 68  S--SKTKLLCRKCGVHIGYGYCRESPALCGLEPSVSSSSQGKFIIKIRSLQPS 118
           S   +TKLLCR CG H+GY Y   S +  G+     S     + IK+ SL PS
Sbjct: 69  SKRQRTKLLCRSCGNHLGYAYTSPSQSWDGI-----SDDSRIYDIKLTSLLPS 116


>Glyma04g42880.1 
          Length = 112

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 5/56 (8%)

Query: 36 SVKKGSISFASVDLSRFTQVDEISCFP----VSW-FNSSKTKLLCRKCGVHIGYGY 86
          S+K+G ISF +VD SRFT+VDEI   P     SW F   KTKLLCRKC  HI   +
Sbjct: 37 SLKRGIISFLNVDDSRFTRVDEIEFAPYFSKYSWGFFRRKTKLLCRKCCNHIALHH 92