Miyakogusa Predicted Gene

Lj3g3v2385410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2385410.1 tr|B9P7R2|B9P7R2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_793382 PE=4
SV=1,39.67,0.000000001,Chaperone J-domain,Heat shock protein DnaJ,
N-terminal; DNAJ_2,Heat shock protein DnaJ, N-terminal; ,CUFF.43944.1
         (165 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g24740.1                                                       152   1e-37
Glyma08g07900.1                                                       127   5e-30
Glyma08g19230.1                                                       124   6e-29
Glyma08g19220.1                                                       123   8e-29
Glyma05g21380.1                                                        79   2e-15
Glyma08g11580.1                                                        52   3e-07
Glyma05g28560.1                                                        51   5e-07
Glyma12g03460.1                                                        50   1e-06

>Glyma05g24740.1 
          Length = 188

 Score =  152 bits (385), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/174 (54%), Positives = 114/174 (65%), Gaps = 35/174 (20%)

Query: 19  FPHSSKQ-QRTFLVNF-AISCRGATKLKEETTHGNLYKVLSLKPGSA-MDEIKRAY---- 71
            P SSKQ +R   V F ++SCR  T  +E     NLYK+LS+ PGSA MDEIKRAY    
Sbjct: 23  LPLSSKQHRRPSSVKFGSVSCRATTLTQE-----NLYKILSVSPGSATMDEIKRAYRSMA 77

Query: 72  -------SHDPSMKEESTKMFVQLNEAYKTLSNPLLREQYDSELGFRSEM---------- 114
                   HDPSMKEEST+MFVQLN AY+TLSNP LREQYDSELG RSE+          
Sbjct: 78  LQYHPDVCHDPSMKEESTRMFVQLNAAYETLSNPRLREQYDSELGLRSEVMSVSSDHERW 137

Query: 115 -NINVSDEGLR--SMWQEQVVHDMNMKTKSRRRMGQKGGSWSSRMKTQNMENKN 165
            +++VS E  R  S +QEQV+    +KT+SRRRMGQKGGS  SRM+  NM ++N
Sbjct: 138 RSVSVSSEHERWESRFQEQVI---ELKTRSRRRMGQKGGSSGSRMRAPNMRDRN 188


>Glyma08g07900.1 
          Length = 195

 Score =  127 bits (319), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/179 (53%), Positives = 113/179 (63%), Gaps = 40/179 (22%)

Query: 19  FPHSSKQ-QRTFLVNFA-ISCRGATKLKEETTHGNLYKVLSLKPGSA-MDEIKRAY---- 71
           F  SSK  QR   V F  +SCR AT  +E     NLYK+LS+ PGSA MDEIKRAY    
Sbjct: 25  FQFSSKHHQRASSVKFGGVSCRAATLTQE-----NLYKILSVCPGSATMDEIKRAYRSMA 79

Query: 72  -------SHDPSMKEESTKMFVQLNEAYKTLSNPLLREQYDSELGFRS-EM--------- 114
                   HDPSMKEEST+MFVQLN AYKTLSNP LRE+YDSELG  S EM         
Sbjct: 80  LQYHPDVCHDPSMKEESTRMFVQLNTAYKTLSNPRLREEYDSELGLGSTEMSTVSSDHHE 139

Query: 115 ---NINVSDEGLR--SMWQEQVVHDMNMKTKSRRRM---GQKGGSWSSRMKTQNMENKN 165
              +++VS E  R  S +QEQ++    +KT+SRRRM   GQ G S SSRM+TQNM ++N
Sbjct: 140 RWGSVSVSSEHERWESRFQEQMI---ELKTRSRRRMGQKGQGGSSGSSRMRTQNMRDRN 195


>Glyma08g19230.1 
          Length = 171

 Score =  124 bits (310), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/154 (50%), Positives = 91/154 (59%), Gaps = 19/154 (12%)

Query: 22  SSKQQRTF--LVNFAISCRGATKLKEETTHGNLYKVLSLKPGSAM-DEIKRAY------- 71
           S KQQR       F +SCRG  +L       NLYKVLSL P SA  D+IK+AY       
Sbjct: 22  SKKQQRERHPRTQFGVSCRGRKELGG-GVEDNLYKVLSLSPKSATTDDIKKAYRSMALRY 80

Query: 72  ----SHDPSMKEESTKMFVQLNEAYKTLSNPLLREQYDSELGFRSEMNINVSDEGLRSMW 127
                 D S KEEST+MFVQLN AY+TLSNP LR +YD ELG RSE  I V DE  R +W
Sbjct: 81  HPDVCQDCSKKEESTRMFVQLNAAYQTLSNPRLRAEYDCELGLRSE-KIGVGDETWRYIW 139

Query: 128 QEQVVHDMNMKTKSRRRMGQKGGSWSSRMKTQNM 161
           Q Q+     +K +S  RM Q  GSW SR++ QN+
Sbjct: 140 QNQLAE---LKRRSHIRMAQNQGSWGSRIRPQNI 170


>Glyma08g19220.1 
          Length = 148

 Score =  123 bits (309), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 72/141 (51%), Positives = 87/141 (61%), Gaps = 17/141 (12%)

Query: 33  FAISCRGATKLKEETTHGNLYKVLSLKPGSAM-DEIKRAY-----------SHDPSMKEE 80
           F +SCRG  +L       NLYKVLSL P SA  D+IK+AY             D S KEE
Sbjct: 12  FGVSCRGRKELGG-GVEDNLYKVLSLSPKSATTDDIKKAYRSMALRYHPDVCQDCSKKEE 70

Query: 81  STKMFVQLNEAYKTLSNPLLREQYDSELGFRSEMNINVSDEGLRSMWQEQVVHDMNMKTK 140
           ST+MFVQLN AY+TLSNP LR +YD ELG RSE  I+V DE  R +WQ Q+     +K +
Sbjct: 71  STRMFVQLNAAYQTLSNPRLRAEYDCELGLRSE-KISVGDETWRYIWQNQLAE---LKRR 126

Query: 141 SRRRMGQKGGSWSSRMKTQNM 161
           S  RM Q  GSW SR++ QN+
Sbjct: 127 SHIRMAQNQGSWGSRIRPQNI 147


>Glyma05g21380.1 
          Length = 102

 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/103 (49%), Positives = 63/103 (61%), Gaps = 18/103 (17%)

Query: 64  MDEIKRAY-----------SHDPSMKEESTKMFVQLNEAYKTLSNPLLREQYDSELGFRS 112
           MD+IK+AY            HDPSMKE+ST+MFVQLN AYKTLSNP LRE     +    
Sbjct: 1   MDDIKKAYRSMALQYHHDVCHDPSMKEDSTRMFVQLNAAYKTLSNPRLREYEVMSVSSDH 60

Query: 113 E--MNINVSDEGLR--SMWQEQVVHDMNMKTKSRRRMGQKGGS 151
           E   +++VS E  R  S + EQV+    +KT+S R MGQK GS
Sbjct: 61  ERWRSVSVSTEHDRWESRFHEQVI---ELKTRSHRHMGQKDGS 100


>Glyma08g11580.1 
          Length = 186

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 25/137 (18%)

Query: 51  NLYKVLSLKPGSAMDEIKRAYSH----------DPSMKEESTKMFVQLNEAYKTLSNPLL 100
           + Y +L +    ++ EIK AY             P   EE TK F+Q+ EAY+TLS+P  
Sbjct: 51  SFYDLLGIPESGSVTEIKNAYKQLARKYHPDVSPPGRVEEYTKRFIQVQEAYETLSDPSR 110

Query: 101 REQYDSEL------GFRSEMNINVSDEGL------RSMWQEQVVHDMNMKTKSRRRMGQK 148
           R  YD ++       F +    N  D+ +      ++ W+ Q+     +K KS  +    
Sbjct: 111 RAMYDKDMAKGINFAFNARRRYNYHDQVVEQKSEWKARWKSQLSE---LKRKSNGKDAGG 167

Query: 149 GGSWSSRMKTQNMENKN 165
             SW++RM+ Q  E  N
Sbjct: 168 NMSWAARMRQQRDELSN 184


>Glyma05g28560.1 
          Length = 184

 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 25/137 (18%)

Query: 51  NLYKVLSLKPGSAMDEIKRAYSH----------DPSMKEESTKMFVQLNEAYKTLSNPLL 100
           + Y++L +    ++ EIK AY             P   EE TK F+Q+ EAY+TLS+P  
Sbjct: 49  SFYELLGIPESVSVTEIKNAYKQLARKYHPDVSPPGRVEEYTKRFIQVQEAYETLSDPSR 108

Query: 101 REQYDSE------LGFRSEMNINVSDEGL--RSMWQEQVVHDMNMKTKSRRRMGQK--GG 150
           R  YD +      L F +    N  D+ +  +S W+   V   +  ++ +RR   K  GG
Sbjct: 109 RAMYDKDMARGINLAFNARRRYNYHDQVVEQKSEWK---VRWKSQLSELKRRSNSKDVGG 165

Query: 151 --SWSSRMKTQNMENKN 165
             SW++RM+ Q  E  N
Sbjct: 166 NMSWAARMRQQRDELSN 182


>Glyma12g03460.1 
          Length = 101

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 11/80 (13%)

Query: 50  GNLYKVLSLKPGSAMDEIKRAY-----SHDPSM-----KEESTKMFVQLNEAYKTLSNPL 99
            +LY VL +  G++  EIK AY     +H P +     KE S   F+ ++ AY TLS+P 
Sbjct: 2   ASLYDVLGISVGASCIEIKAAYRKLARTHHPDVVAMDQKESSANQFMMIHSAYSTLSDPE 61

Query: 100 LREQYDSELGFRSEMNINVS 119
            R QYD E+ +R   + N++
Sbjct: 62  KRAQYDREI-YRYRRSANIA 80