Miyakogusa Predicted Gene

Lj3g3v2330880.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2330880.2 Non Chatacterized Hit- tr|B9FAB8|B9FAB8_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,27.78,3e-18,coiled-coil,NULL; seg,NULL; OS03G0143700
PROTEIN,NULL; PHOSPHATIDYLINOSITOL
N-ACETYLGLUCOSAMINYLTRAN,CUFF.43925.2
         (388 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g07660.1                                                       274   1e-73
Glyma03g01120.1                                                       268   7e-72
Glyma07g07670.1                                                       127   2e-29

>Glyma07g07660.1 
          Length = 177

 Score =  274 bits (700), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 137/175 (78%), Positives = 154/175 (88%)

Query: 44  RMGSQEYENSSKKISSLPRLTYSREESQPPNSRSSGNLMVKWNSADPKSQLSEGLEHRIG 103
           R+GSQE+ENS ++ISSL R TYSREESQ PNSRSS NLM+KWNSAD KSQLSEGLEHRIG
Sbjct: 1   RVGSQEHENSLRRISSLSRPTYSREESQAPNSRSSSNLMLKWNSADHKSQLSEGLEHRIG 60

Query: 104 MMETSLSRFAMILDSVQSDVMQVNKGTKEMILDMDYIRQKLIAQDNSLQLMTKGQEDIKA 163
           +METSLSRF MILDSVQSDVMQVNKGTKE+IL+++ IRQKLIAQDNSLQLMTKGQE+IKA
Sbjct: 61  IMETSLSRFTMILDSVQSDVMQVNKGTKEIILEVECIRQKLIAQDNSLQLMTKGQEEIKA 120

Query: 164 RIDGSLKSVTEQLSQVTNNEKLQEVYLMVSAFPQLFEASLRNVQTYLHNTTKEMQ 218
            I+ SLKS+ EQ+S V+  EKLQ+VYL VSA PQL EASL+NVQ  L N TKEMQ
Sbjct: 121 IIERSLKSLAEQMSHVSKKEKLQDVYLAVSALPQLIEASLQNVQNDLRNITKEMQ 175


>Glyma03g01120.1 
          Length = 204

 Score =  268 bits (685), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 133/178 (74%), Positives = 154/178 (86%)

Query: 44  RMGSQEYENSSKKISSLPRLTYSREESQPPNSRSSGNLMVKWNSADPKSQLSEGLEHRIG 103
           R+GSQE+ENS +++SS  R TYSREESQ PNSRSS NLM+KW+SAD KSQLSEGLEHRIG
Sbjct: 1   RVGSQEHENSLRRMSSFSRPTYSREESQAPNSRSSSNLMLKWHSADHKSQLSEGLEHRIG 60

Query: 104 MMETSLSRFAMILDSVQSDVMQVNKGTKEMILDMDYIRQKLIAQDNSLQLMTKGQEDIKA 163
           +METSL RF MILDSVQSDVMQVNKGTKE+ L+++ IRQKLIAQDNSLQLMTKGQE+IKA
Sbjct: 61  IMETSLGRFTMILDSVQSDVMQVNKGTKEITLEVECIRQKLIAQDNSLQLMTKGQEEIKA 120

Query: 164 RIDGSLKSVTEQLSQVTNNEKLQEVYLMVSAFPQLFEASLRNVQTYLHNTTKEMQEIS 221
            I+GSLKS+ EQ+S V+  EKL+EVYL VSA PQL EASL+NVQ  L N TKEMQ ++
Sbjct: 121 IIEGSLKSLAEQMSHVSKKEKLREVYLAVSALPQLIEASLQNVQNDLRNITKEMQALT 178


>Glyma07g07670.1 
          Length = 109

 Score =  127 bits (318), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/97 (69%), Positives = 78/97 (80%), Gaps = 4/97 (4%)

Query: 280 EVKMRTRAAAAPKVKMGGWMSVKKE-VTFSDRISEKVQKKKEPCSEKIVRGGRDCAIVIE 338
           E K+  +A  AP+V+ GGW  VKKE VTFSDR SEKVQKKKEP ++K +RGGRDCAIVIE
Sbjct: 1   EAKVSIQATVAPEVESGGWKPVKKERVTFSDRTSEKVQKKKEPHTQKYIRGGRDCAIVIE 60

Query: 339 SDEE-DGAFSCLVEENA--DLFGNITKEEEEETQRIL 372
           SDEE DG FSCLV+ENA  +L GN+TKE  EET+RIL
Sbjct: 61  SDEEIDGGFSCLVQENAGVNLLGNLTKEALEETERIL 97