Miyakogusa Predicted Gene

Lj3g3v2318160.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2318160.1 Non Chatacterized Hit- tr|C0PLH8|C0PLH8_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,29.4,4e-18,seg,NULL,CUFF.43857.1
         (468 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g21480.1                                                       336   3e-92
Glyma07g01820.1                                                       285   7e-77

>Glyma08g21480.1 
          Length = 388

 Score =  336 bits (861), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 214/449 (47%), Positives = 269/449 (59%), Gaps = 74/449 (16%)

Query: 26  DDTFDRLHSDLSSLFLQIDEIVVKAFGL-----KKVSQKGSKKIEPFSHVLSDLLSCLKP 80
           +D   RL   LSSL  QIDE+VV+A  +     K +S++G  +IE FS VLSD+LS L+P
Sbjct: 8   EDDLHRLRY-LSSLLHQIDELVVQAIEVNYNNNKTISKEGKTQIESFSRVLSDMLSSLEP 66

Query: 81  WVPRLQIALSSLSVESESKNEQVSFCEESNVSECGSPQETTLDXXXXXXXXXXWRGDCTV 140
           WVP++Q AL          N Q +  ++  + EC SP+ETTL+          WR +CTV
Sbjct: 67  WVPKIQKAL----------NPQNTVSDDETI-ECDSPEETTLNLVSPSPLVS-WRANCTV 114

Query: 141 DRGRQMFMLTPLPLSRALLSTKPKQPQTKSESDELASSTYGIGTSTFLDLSRDMNTLLDS 200
           +RGRQMFMLTPLPLS     +K  QP+        +S+T                T  DS
Sbjct: 115 ERGRQMFMLTPLPLS-----SKHHQPKPHFPPPTTSSTT----------------TFKDS 153

Query: 201 VLMKQAPTEPAPSSVAIEEANNEEPGLISSPFVPKRDTSMLVMMTPCLKMSPPRSCVLLE 260
           V++K       P+ +  +  NN+             D SML+MMTPCLKMSPPRSC+LLE
Sbjct: 154 VMVK-------PTPIKQQLPNNQ-------------DGSMLLMMTPCLKMSPPRSCLLLE 193

Query: 261 PISEIHHRGNDKVRKCTPFPVGVHYXXXXXXXXXXXXXXXXXXXKYPELLGLQKVSKSGL 320
           PISEI   G+   RK TP+PVG+H                     YPELLG+ K   SG+
Sbjct: 194 PISEISRLGDRNARKGTPYPVGIHCSDSESSSSDDSSRDLSLM--YPELLGIHK---SGI 248

Query: 321 GKKNVEASPAWLTSPPKTCVLLEPSDETSLELEKADNEPCIQITDSVLKQPVSKLKDD-I 379
           GKK VEASP W TSPPKTCVLLEP DE      K D   C+QI DS+L + VSK +DD +
Sbjct: 249 GKKTVEASPDWFTSPPKTCVLLEPPDE------KIDEHLCVQIADSILNEQVSKFEDDDV 302

Query: 380 SKDRNQAKISCDQDHSIVNSLHIESTPMWPEPESSFRTGKRPGENTLKKELWTKFEAATA 439
           SKD +QAK SC+QDH + N  H++STP+   PESSF+TGK PGENTLKKELWTKFEAA+ 
Sbjct: 303 SKDHDQAKKSCNQDHFVGNLSHVKSTPL---PESSFQTGKCPGENTLKKELWTKFEAAST 359

Query: 440 GGFQSKLSTVQENTRKGFLDLLEEASNEQ 468
            G Q K+ T Q++  KGFLDLLEEAS ++
Sbjct: 360 WGCQPKVPTGQKSAHKGFLDLLEEASCDE 388


>Glyma07g01820.1 
          Length = 361

 Score =  285 bits (729), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 193/430 (44%), Positives = 240/430 (55%), Gaps = 94/430 (21%)

Query: 42  QIDEIVVKAFGL-----KKVSQKGSKKIEPFSHVLSDLLSCLKPWVPRLQIALSSLSVES 96
           QIDE+VV+A  +     K +S++G  +IE FS VLSD+LS LKPW+P++Q AL+   + S
Sbjct: 17  QIDEVVVQAIEVNYKNNKTISKEGKTQIESFSRVLSDMLSSLKPWLPKIQNALNPQDIVS 76

Query: 97  ESKNEQVSFCEESNVSECGSPQETTLDXXXXXXXXXXWRGDCTVDRGRQMFMLTPLPLSR 156
           +         +E+   +   P+ETTL+          WR +CTV RGRQMFMLTPLP   
Sbjct: 77  D---------DETRECDRPKPEETTLN-LVSPSPLVSWRANCTVKRGRQMFMLTPLP--- 123

Query: 157 ALLSTKPKQPQTKSESDELASSTYGIGTSTFLDLSRDMNTLLDSVLMKQAPTEPAPSSVA 216
             LS+K  QP+        +S+T                T  DS ++K       P+ + 
Sbjct: 124 --LSSKHHQPKPYFPPPTTSSTT----------------TFKDSDMVK-------PTPIK 158

Query: 217 IEEANNEEPGLISSPFVPKRDTSMLVMMTPCLKMSPPRSCVLLEPISEIHHRGND-KVRK 275
            +  NN+             D SMLVMMTPCLKMSPPRSC+LLEPISEI   G D KVRK
Sbjct: 159 QKLPNNQ-------------DRSMLVMMTPCLKMSPPRSCLLLEPISEISRLGGDHKVRK 205

Query: 276 CTPFPVGVHYXXXXXXXXXXXXXXXXXXXKYPELLGLQKVSKSGLGKKNVEASPAWLTSP 335
            TP+PVG+H                     YPEL G+    KSG+GKK VE SP WLTSP
Sbjct: 206 GTPYPVGIHCSDSKSSGSDDSSRDLSLM--YPELQGIH---KSGIGKKTVEVSPDWLTSP 260

Query: 336 PKTCVLLEPSDETSLELEKADNEPCIQITDSVLKQPVSKLKDDISKDRNQAKISCDQDHS 395
           PKTCVLLEP DE  +++ K ++                   DD+S D NQAK SC+Q   
Sbjct: 261 PKTCVLLEPPDEKKIDVSKFED-------------------DDVSNDHNQAKESCNQ--- 298

Query: 396 IVNSLHIESTPMWPEPESSFRTGKRPGENTLKKELWTKFEAATAGGFQSKLSTVQENTRK 455
                  ESTPM   PESSF+ GK PGENTLKKELWTKFE A+  G Q K+ TVQ++  K
Sbjct: 299 -------ESTPM---PESSFQRGKCPGENTLKKELWTKFEVASTWGCQPKVPTVQKSAHK 348

Query: 456 GFLDLLEEAS 465
           GFLDLLEEAS
Sbjct: 349 GFLDLLEEAS 358