Miyakogusa Predicted Gene

Lj3g3v2315230.4
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2315230.4 Non Chatacterized Hit- tr|F6HYC6|F6HYC6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,56.67,0.00000000000004,seg,NULL,CUFF.43779.4
         (300 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g21700.1                                                       214   9e-56
Glyma10g08790.1                                                        51   1e-06
Glyma02g36110.1                                                        50   3e-06

>Glyma08g21700.1 
          Length = 181

 Score =  214 bits (545), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 109/170 (64%), Positives = 127/170 (74%), Gaps = 6/170 (3%)

Query: 16  RSLGLDLRKKTKAYAFPQANSNTIEERNRXXXXXXXXXXXXXRYYTSLRKCSSLGASTNL 75
           RS+GLD+R++T AYA    NSN + ERN                YTSL+KCSSL AST  
Sbjct: 16  RSVGLDIRQRTTAYA----NSNALYERNNNSLNSGLLVGSLSVCYTSLKKCSSLAASTKA 71

Query: 76  HFSCTDQ--NEEEEITNVTSSSQGMEFNRVDCVVWVLHESARSFSQAAESIGLARSGRGL 133
           HFSCTD    E +E+TNVTS+SQGM+FNRVDCVVW+LHES+RSFS+A  S+GLARSG  L
Sbjct: 72  HFSCTDDQSKEADEVTNVTSTSQGMKFNRVDCVVWLLHESSRSFSEAINSLGLARSGPAL 131

Query: 134 AMAWIGKDVRVWHRRIAYQVAVYALLKTAIELEILLSQERQNESSPVRNI 183
           AMAWIGKDV  WHRRIAYQVAV+AL+K AI LEILLS ER NE SPV+ +
Sbjct: 132 AMAWIGKDVHEWHRRIAYQVAVHALIKAAIGLEILLSHERLNEFSPVKEM 181


>Glyma10g08790.1 
          Length = 559

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 5/140 (3%)

Query: 104 DCVVWVLHESARSFSQAAESIGLARSGRGLAMAWIGKDVRVWHRRIAYQVAVYALLKTAI 163
           D +V  L+++AR F  A +          L+ AW+G D   W + ++ Q AVY+LL+ A 
Sbjct: 48  DGLVQALYDAARVFELAIKEHKSFSRMSWLSTAWLGVDQNAWVKALSCQAAVYSLLQAAS 107

Query: 164 ELEILLSQERQNESSPVRNILTPLINQMGERIESQLKMKHPYLVQWFRDTKMPRMTGYFI 223
           E+        +N +   +  L  L   +   I  +L  KHP   +WF   ++P     F+
Sbjct: 108 EISSQSDGRGRNVNVFFQRSLLRLSAPLESLIREKLSAKHPEAYEWFWSEQVPAAVASFV 167

Query: 224 PLLKQWSMEYAGRFIQKVWL 243
             L     E  GRF   + L
Sbjct: 168 NKL-----EGDGRFTAAIAL 182


>Glyma02g36110.1 
          Length = 796

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 5/147 (3%)

Query: 104 DCVVWVLHESARSFSQAAESIGLARSGRGLAMAWIGKDVRVWHRRIAYQVAVYALLKTAI 163
           D +V  L+++ R F  A +          L+ AW+G D   W + ++ Q AVY+LL+ A 
Sbjct: 16  DGLVQALYDATRVFELAIKEHKSFSRMSWLSTAWLGVDQNAWVKALSCQAAVYSLLQAAS 75

Query: 164 ELEILLSQERQNESSPVRNILTPLINQMGERIESQLKMKHPYLVQWFRDTKMPRMTGYFI 223
           E+        +N +  V+  L  L   +   I  +L  KHP   +WF   ++P     F+
Sbjct: 76  EISSQSDGRDRNVNVFVQKSLLRLSAPLESLIREKLSAKHPEAYEWFWSEQVPAAVTSFV 135

Query: 224 PLLKQWSMEYAGRFIQKVWLHWDSLHI 250
             L     E  GRF   + L   ++ +
Sbjct: 136 NKL-----EGDGRFTAAIALSGKNMGL 157