Miyakogusa Predicted Gene

Lj3g3v2310040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2310040.1 Non Chatacterized Hit- tr|I3T8D3|I3T8D3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.59,0,Ribosomal_S12,Ribosomal protein S12/S23; S23_S12_E_A:
ribosomal protein S23 (S12),Ribosomal protein ,CUFF.43770.1
         (142 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g36250.1                                                       285   2e-77
Glyma10g05660.1                                                       285   2e-77
Glyma03g33530.1                                                       285   2e-77
Glyma13g20010.1                                                       283   3e-77
Glyma10g05660.2                                                       274   2e-74
Glyma13g20010.2                                                       273   4e-74
Glyma12g07700.1                                                       250   4e-67
Glyma11g15770.1                                                       218   2e-57
Glyma19g36250.2                                                       201   3e-52
Glyma10g05660.3                                                       196   6e-51
Glyma13g20010.3                                                       196   9e-51
Glyma03g33530.2                                                       176   6e-45
Glyma03g22190.1                                                       145   2e-35
Glyma06g38250.1                                                       136   5e-33
Glyma19g25880.1                                                        86   1e-17
Glyma02g27110.1                                                        85   2e-17
Glyma04g21420.1                                                        79   2e-15

>Glyma19g36250.1 
          Length = 142

 Score =  285 bits (728), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 141/142 (99%), Positives = 141/142 (99%)

Query: 1   MGKTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60
           MGKT GMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTHGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 121 VVKVSGVSLLALFKEKKEKPRS 142
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


>Glyma10g05660.1 
          Length = 142

 Score =  285 bits (728), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 141/142 (99%), Positives = 141/142 (99%)

Query: 1   MGKTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60
           MGKT GMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTHGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 121 VVKVSGVSLLALFKEKKEKPRS 142
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


>Glyma03g33530.1 
          Length = 142

 Score =  285 bits (728), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 141/142 (99%), Positives = 141/142 (99%)

Query: 1   MGKTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60
           MGKT GMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTHGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 121 VVKVSGVSLLALFKEKKEKPRS 142
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


>Glyma13g20010.1 
          Length = 142

 Score =  283 bits (725), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 140/142 (98%), Positives = 141/142 (99%)

Query: 1   MGKTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60
           MGKT GMG+ARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTHGMGSARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 121 VVKVSGVSLLALFKEKKEKPRS 142
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


>Glyma10g05660.2 
          Length = 136

 Score =  274 bits (701), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 7   MGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR 66
           MGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR
Sbjct: 1   MGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR 60

Query: 67  KCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSG 126
           KCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSG
Sbjct: 61  KCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSG 120

Query: 127 VSLLALFKEKKEKPRS 142
           VSLLALFKEKKEKPRS
Sbjct: 121 VSLLALFKEKKEKPRS 136


>Glyma13g20010.2 
          Length = 136

 Score =  273 bits (698), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 135/136 (99%), Positives = 136/136 (100%)

Query: 7   MGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR 66
           MG+ARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR
Sbjct: 1   MGSARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR 60

Query: 67  KCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSG 126
           KCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSG
Sbjct: 61  KCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSG 120

Query: 127 VSLLALFKEKKEKPRS 142
           VSLLALFKEKKEKPRS
Sbjct: 121 VSLLALFKEKKEKPRS 136


>Glyma12g07700.1 
          Length = 132

 Score =  250 bits (638), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 127/140 (90%), Positives = 128/140 (91%), Gaps = 8/140 (5%)

Query: 3   KTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPN 62
           KT GMGAARKL SHRRRQR ADKSYKKSHLGNEWKKPFAGSSHAKGI         KQPN
Sbjct: 1   KTHGMGAARKLNSHRRRQRKADKSYKKSHLGNEWKKPFAGSSHAKGIT--------KQPN 52

Query: 63  SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV 122
           SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDE+LIAGFGRKGHAVGDIPGVRFKVV
Sbjct: 53  SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEMLIAGFGRKGHAVGDIPGVRFKVV 112

Query: 123 KVSGVSLLALFKEKKEKPRS 142
           KVSGVSLLALFKEKKEKPRS
Sbjct: 113 KVSGVSLLALFKEKKEKPRS 132


>Glyma11g15770.1 
          Length = 124

 Score =  218 bits (555), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 108/119 (90%), Positives = 111/119 (93%), Gaps = 1/119 (0%)

Query: 3   KTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPN 62
           KT GMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPN
Sbjct: 1   KTHGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPN 60

Query: 63  SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKV 121
           SAIRKCARVQLIKNGKKIAAFVPNDGCLNY EEN  +LIAGFGRKGHAVGDIP    ++
Sbjct: 61  SAIRKCARVQLIKNGKKIAAFVPNDGCLNYTEENI-MLIAGFGRKGHAVGDIPEFDLRL 118


>Glyma19g36250.2 
          Length = 109

 Score =  201 bits (510), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 108/142 (76%), Positives = 108/142 (76%), Gaps = 33/142 (23%)

Query: 1   MGKTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60
           MGKT GMGAARKLKSHRRRQR                                 GIEAKQ
Sbjct: 1   MGKTHGMGAARKLKSHRRRQR---------------------------------GIEAKQ 27

Query: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 28  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 87

Query: 121 VVKVSGVSLLALFKEKKEKPRS 142
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 88  VVKVSGVSLLALFKEKKEKPRS 109


>Glyma10g05660.3 
          Length = 105

 Score =  196 bits (498), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 95/96 (98%), Positives = 95/96 (98%)

Query: 1  MGKTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60
          MGKT GMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1  MGKTHGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 61 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEEN 96
          PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEEN
Sbjct: 61 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEEN 96


>Glyma13g20010.3 
          Length = 115

 Score =  196 bits (497), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 94/96 (97%), Positives = 95/96 (98%)

Query: 1  MGKTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60
          MGKT GMG+ARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1  MGKTHGMGSARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 61 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEEN 96
          PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEEN
Sbjct: 61 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEEN 96


>Glyma03g33530.2 
          Length = 101

 Score =  176 bits (447), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 88/88 (100%), Positives = 88/88 (100%)

Query: 55  GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 114
           GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI
Sbjct: 14  GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 73

Query: 115 PGVRFKVVKVSGVSLLALFKEKKEKPRS 142
           PGVRFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 74  PGVRFKVVKVSGVSLLALFKEKKEKPRS 101


>Glyma03g22190.1 
          Length = 208

 Score =  145 bits (365), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/98 (75%), Positives = 76/98 (77%), Gaps = 14/98 (14%)

Query: 13  LKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKI--------------GIEA 58
           LKSH RRQRW DKSYKKSHLG EWKKPFAGSS+AKGI LEKI              GIEA
Sbjct: 15  LKSHSRRQRWVDKSYKKSHLGIEWKKPFAGSSYAKGIGLEKIVYSFKKLRCFSICRGIEA 74

Query: 59  KQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEEN 96
           KQPNSAI  C RVQLIKN KKIAAFVPNDGCLNYIEE+
Sbjct: 75  KQPNSAIPNCVRVQLIKNWKKIAAFVPNDGCLNYIEEH 112


>Glyma06g38250.1 
          Length = 77

 Score =  136 bits (343), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/77 (88%), Positives = 68/77 (88%)

Query: 20 QRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKK 79
          QRWA KSYK SHLGNEWKK FAGSSHAKGIVLEKIGIEAKQPN AI KCARVQLIKN KK
Sbjct: 1  QRWAGKSYKNSHLGNEWKKLFAGSSHAKGIVLEKIGIEAKQPNFAIDKCARVQLIKNWKK 60

Query: 80 IAAFVPNDGCLNYIEEN 96
          IAAF PNDG LNYIE N
Sbjct: 61 IAAFFPNDGFLNYIEAN 77


>Glyma19g25880.1 
          Length = 77

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 47/71 (66%)

Query: 13 LKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQ 72
          LKSH RRQ+WADKSYKKSHLGN+WK PF GSSHAKGIVLEKI +    P           
Sbjct: 1  LKSHHRRQKWADKSYKKSHLGNDWKNPFVGSSHAKGIVLEKIVLRLSSPTLPFVSVPGFN 60

Query: 73 LIKNGKKIAAF 83
          L + G+++   
Sbjct: 61 LSRIGRRLPLL 71


>Glyma02g27110.1 
          Length = 54

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/48 (81%), Positives = 39/48 (81%)

Query: 58  AKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFG 105
            K PNSAI KC RVQLIKN KKI AFVPNDGCLNYIEENDEVLI  F 
Sbjct: 1   CKHPNSAIHKCVRVQLIKNWKKIVAFVPNDGCLNYIEENDEVLIIVFN 48


>Glyma04g21420.1 
          Length = 139

 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/64 (59%), Positives = 46/64 (71%), Gaps = 4/64 (6%)

Query: 38  KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEEND 97
           +PFA +S      +  IGIEAKQPN  I+K A+VQLIKN KKI AFVPND CLNY+EEN 
Sbjct: 42  EPFAFTSST----VNTIGIEAKQPNFDIQKSAKVQLIKNEKKIVAFVPNDSCLNYLEENV 97

Query: 98  EVLI 101
            ++ 
Sbjct: 98  TIIF 101