Miyakogusa Predicted Gene

Lj3g3v2309730.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2309730.1 Non Chatacterized Hit- tr|D7G9G5|D7G9G5_ECTSI
Putative uncharacterized protein OS=Ectocarpus
silicul,50,1e-18,L28p-like,NULL; Ribosomal_L28,Ribosomal protein L28;
39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL,Riboso,CUFF.44284.1
         (190 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g15850.2                                                       331   2e-91
Glyma11g15850.1                                                       331   2e-91
Glyma12g07620.1                                                       331   3e-91

>Glyma11g15850.2 
          Length = 235

 Score =  331 bits (849), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 153/190 (80%), Positives = 173/190 (91%)

Query: 1   MAFRGKEMMKKVLKKVGEKNLTPKAKESLQKCIPKTKIVMGRAKRGLFAGRHIQFGNTVS 60
           MAFRGKEM+KKVLK VGE  L+ + KESL++C+P++KIVM RAKRGLFAG+HIQFGN VS
Sbjct: 1   MAFRGKEMLKKVLKTVGENGLSRREKESLERCLPRSKIVMNRAKRGLFAGKHIQFGNRVS 60

Query: 61  EDGGNKTRRNWKPNVQDKRLFSYILDRHIRAKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNK+RR WKPNVQ+KRLFSYILDRH+R K+TTHALRCIDKAGGIDEYL+KTPYHKMD
Sbjct: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHVRVKITTHALRCIDKAGGIDEYLMKTPYHKMD 120

Query: 121 TEIGVLWKAKIEKLYEELGKKEVVFFSPEDEANFEQSFKDLKLSEREARKEIRKIMYAGM 180
           TE+G+LWKAKIEKLYEELG KEVVFFSPEDEA FEQ F DLKL+EREARKE+R+ MY GM
Sbjct: 121 TEMGILWKAKIEKLYEELGNKEVVFFSPEDEAKFEQEFNDLKLTEREARKEVRRKMYTGM 180

Query: 181 GKHKLIGVDR 190
            KHKLI V+R
Sbjct: 181 SKHKLIEVER 190


>Glyma11g15850.1 
          Length = 235

 Score =  331 bits (849), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 153/190 (80%), Positives = 173/190 (91%)

Query: 1   MAFRGKEMMKKVLKKVGEKNLTPKAKESLQKCIPKTKIVMGRAKRGLFAGRHIQFGNTVS 60
           MAFRGKEM+KKVLK VGE  L+ + KESL++C+P++KIVM RAKRGLFAG+HIQFGN VS
Sbjct: 1   MAFRGKEMLKKVLKTVGENGLSRREKESLERCLPRSKIVMNRAKRGLFAGKHIQFGNRVS 60

Query: 61  EDGGNKTRRNWKPNVQDKRLFSYILDRHIRAKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNK+RR WKPNVQ+KRLFSYILDRH+R K+TTHALRCIDKAGGIDEYL+KTPYHKMD
Sbjct: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHVRVKITTHALRCIDKAGGIDEYLMKTPYHKMD 120

Query: 121 TEIGVLWKAKIEKLYEELGKKEVVFFSPEDEANFEQSFKDLKLSEREARKEIRKIMYAGM 180
           TE+G+LWKAKIEKLYEELG KEVVFFSPEDEA FEQ F DLKL+EREARKE+R+ MY GM
Sbjct: 121 TEMGILWKAKIEKLYEELGNKEVVFFSPEDEAKFEQEFNDLKLTEREARKEVRRKMYTGM 180

Query: 181 GKHKLIGVDR 190
            KHKLI V+R
Sbjct: 181 SKHKLIEVER 190


>Glyma12g07620.1 
          Length = 235

 Score =  331 bits (848), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 155/190 (81%), Positives = 172/190 (90%)

Query: 1   MAFRGKEMMKKVLKKVGEKNLTPKAKESLQKCIPKTKIVMGRAKRGLFAGRHIQFGNTVS 60
           MAFRGKEMMKKVLK VGE  L+ + KESL++C+P++KIVM RAKRGLFAG+HIQFGN VS
Sbjct: 1   MAFRGKEMMKKVLKTVGENGLSRREKESLERCLPRSKIVMNRAKRGLFAGKHIQFGNRVS 60

Query: 61  EDGGNKTRRNWKPNVQDKRLFSYILDRHIRAKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNK+RR WKPNVQ+KRLFSYILDRH+R KVTTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHVRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TEIGVLWKAKIEKLYEELGKKEVVFFSPEDEANFEQSFKDLKLSEREARKEIRKIMYAGM 180
           TE+G+LWKAKIEKLYEELG KEVVFFSPEDE  FEQ F+DLKLSEREARKE+R+ MY GM
Sbjct: 121 TEMGILWKAKIEKLYEELGNKEVVFFSPEDEVKFEQEFEDLKLSEREARKEVRRKMYTGM 180

Query: 181 GKHKLIGVDR 190
            K KLI V+R
Sbjct: 181 SKQKLIEVER 190