Miyakogusa Predicted Gene

Lj3g3v2298670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2298670.1 tr|D8LRR1|D8LRR1_ECTSI Proteasome subunit beta
type OS=Ectocarpus siliculosus GN=Psb4 PE=3
SV=1,47.96,5e-19,PROTEASOME_B_2,Proteasome B-type subunit; PROTEASOME
SUBUNIT BETA TYPE 4,NULL; PROTEASOME SUBUNIT AL,CUFF.44276.1
         (97 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g43120.1                                                       198   1e-51
Glyma19g43120.2                                                       198   1e-51
Glyma03g40470.1                                                       197   2e-51

>Glyma19g43120.1 
          Length = 232

 Score =  198 bits (504), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 89/97 (91%), Positives = 97/97 (100%)

Query: 1   MIGVNFEDNHIATGLGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLYRDRSAVNKIQ 60
           MIG+NFEDNH+ATGLGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLYRDRSAVNKIQ
Sbjct: 136 MIGINFEDNHVATGLGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLYRDRSAVNKIQ 195

Query: 61  IAKMTEEGATMFPPFSLKTYWEFSAFRNPTLGAEGSW 97
           I+K+T+EGAT+FPPFSLKTYWEFSAF+NPT+GAEGSW
Sbjct: 196 ISKITDEGATVFPPFSLKTYWEFSAFKNPTVGAEGSW 232


>Glyma19g43120.2 
          Length = 216

 Score =  198 bits (503), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 89/97 (91%), Positives = 97/97 (100%)

Query: 1   MIGVNFEDNHIATGLGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLYRDRSAVNKIQ 60
           MIG+NFEDNH+ATGLGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLYRDRSAVNKIQ
Sbjct: 120 MIGINFEDNHVATGLGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLYRDRSAVNKIQ 179

Query: 61  IAKMTEEGATMFPPFSLKTYWEFSAFRNPTLGAEGSW 97
           I+K+T+EGAT+FPPFSLKTYWEFSAF+NPT+GAEGSW
Sbjct: 180 ISKITDEGATVFPPFSLKTYWEFSAFKNPTVGAEGSW 216


>Glyma03g40470.1 
          Length = 232

 Score =  197 bits (501), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 88/97 (90%), Positives = 97/97 (100%)

Query: 1   MIGVNFEDNHIATGLGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLYRDRSAVNKIQ 60
           MIG+NFEDNH+ATGLGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLYRDRSAVNKIQ
Sbjct: 136 MIGINFEDNHVATGLGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLYRDRSAVNKIQ 195

Query: 61  IAKMTEEGATMFPPFSLKTYWEFSAFRNPTLGAEGSW 97
           I+K+T+EGAT+FPPFSLKTYWEF+AF+NPT+GAEGSW
Sbjct: 196 ISKITDEGATVFPPFSLKTYWEFAAFKNPTVGAEGSW 232