Miyakogusa Predicted Gene

Lj3g3v2297640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2297640.1 Non Chatacterized Hit- tr|K0T5B2|K0T5B2_THAOC
Uncharacterized protein OS=Thalassiosira oceanica
PE=4,46.15,0.0000000004,seg,NULL,CUFF.44268.1
         (252 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g27370.1                                                       138   5e-33
Glyma11g15840.2                                                       105   3e-23
Glyma11g15840.1                                                       105   3e-23

>Glyma11g27370.1 
          Length = 270

 Score =  138 bits (348), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/193 (48%), Positives = 113/193 (58%), Gaps = 44/193 (22%)

Query: 79  AAETVSNKLAGMHIGENSEQTGLGHANKGAIWKHKSYGTTA---APEVDNKPAGKVAVDG 135
           A ETVSNKL G+ IGENS +T    +    IWK KSYGT +     EV+N         G
Sbjct: 12  AVETVSNKLGGLSIGENSGKTAAQGST--VIWKRKSYGTASGGNVTEVEN---------G 60

Query: 136 ARVDAGGVASTQKSGISGAGLSKLFQGNLLEKFEVDNSTYSQAHIRATFYPKFENEKSDQ 195
           A VDAG VASTQKS  SG+GLSK+F GN L+ F     TYS+A +RATFYPKFENEK+DQ
Sbjct: 61  AGVDAG-VASTQKS--SGSGLSKIFCGNFLKNF-----TYSRAQVRATFYPKFENEKADQ 112

Query: 196 E-------------TRTRMIEMVSKGLATLEVSLKH---SGSLFMYAGHEGGAYAKNSFG 239
           E              RTRMIE+V+KGLAT++    +        ++ G+         F 
Sbjct: 113 EAYSFCHKFSLFRNVRTRMIELVAKGLATIKFYWLYYFICNYFLLFIGY------TILFL 166

Query: 240 NIYTAVGVFVLGR 252
           N YTAV VFVLGR
Sbjct: 167 NSYTAVSVFVLGR 179


>Glyma11g15840.2 
          Length = 969

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/52 (96%), Positives = 52/52 (100%)

Query: 201 MIEMVSKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGR 252
           MIE+V+KGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGR
Sbjct: 1   MIELVAKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGR 52


>Glyma11g15840.1 
          Length = 969

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/52 (96%), Positives = 52/52 (100%)

Query: 201 MIEMVSKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGR 252
           MIE+V+KGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGR
Sbjct: 1   MIELVAKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGR 52