Miyakogusa Predicted Gene

Lj3g3v2296580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2296580.1 Non Chatacterized Hit- tr|G7II42|G7II42_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,37.42,8e-19,seg,NULL,
gene.Ljchr3_pseudomol_20120830.path1.gene4971.1
         (165 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g22060.1                                                       126   9e-30
Glyma08g22050.1                                                       114   5e-26
Glyma13g43610.1                                                        73   2e-13
Glyma09g32220.1                                                        59   2e-09

>Glyma08g22060.1 
          Length = 145

 Score =  126 bits (317), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 60/105 (57%), Positives = 81/105 (77%), Gaps = 2/105 (1%)

Query: 19  ADVWISVAVRVQNRDVYWMDLEEVDVGVKYRGKKLGHVESKRWHVRRWGTIHAFGELESS 78
           ADV IS++VRV+NRD+YWM++ EVDVG+KYR KK+GHVE K W V+ W + H   E+  +
Sbjct: 41  ADVSISMSVRVRNRDIYWMEMREVDVGMKYRRKKMGHVELKGWQVKGWSSTHVEAEVVFA 100

Query: 79  ALPSADVAHLLQDLSKGKVFFHTVTEVTGYVGFLSF--PLPIEFK 121
            LPS+ V +LL+D++KGKV+F TV E++G  G LSF  PLP+EFK
Sbjct: 101 ELPSSQVPYLLEDVAKGKVYFRTVVELSGQFGILSFRTPLPLEFK 145


>Glyma08g22050.1 
          Length = 174

 Score =  114 bits (285), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 53/77 (68%), Positives = 64/77 (83%)

Query: 19  ADVWISVAVRVQNRDVYWMDLEEVDVGVKYRGKKLGHVESKRWHVRRWGTIHAFGELESS 78
           ADVWIS++VRVQNR +YWM+L +VDVGVKYRGKK+GHVES+ WHVR W +    G LE S
Sbjct: 61  ADVWISLSVRVQNRCMYWMELTDVDVGVKYRGKKMGHVESEGWHVRGWASTKVDGVLEFS 120

Query: 79  ALPSADVAHLLQDLSKG 95
            LPS++VAHLLQDL+ G
Sbjct: 121 GLPSSEVAHLLQDLAMG 137


>Glyma13g43610.1 
          Length = 150

 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 63/101 (62%), Gaps = 1/101 (0%)

Query: 20  DVWISVAVRVQNRDVYWMDLEEVDVGVKYRGKKLGHVESKRWHVRRWGTIHAFGELESSA 79
           D+ + + +RV N DVY+MD   V+V V YRGK LGHV S+R HVR  G+ +   ++E + 
Sbjct: 50  DISMLLTLRVHNVDVYFMDFGAVNVAVAYRGKMLGHVTSRRMHVRARGSSYVDADVEFAG 109

Query: 80  LP-SADVAHLLQDLSKGKVFFHTVTEVTGYVGFLSFPLPIE 119
           +    ++  LL+D+++G V F T++   G +G L F  PI+
Sbjct: 110 ISVLPELVLLLEDVARGIVPFDTISHAKGQLGLLFFHFPIK 150


>Glyma09g32220.1 
          Length = 257

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 1/101 (0%)

Query: 20  DVWISVAVRVQNRDVYWMDLEEVDVGVKYRGKKLGHVESKRWHVRRWGTIHAFGELESSA 79
           D+  S+ V+V+NRD + +  + + V V YRG++LG V +    +R  G+ +    L    
Sbjct: 116 DLSFSLTVKVRNRDFFSLSYDSLTVSVGYRGRQLGFVTAGGGSIRARGSSYVDATLTIDG 175

Query: 80  LPSA-DVAHLLQDLSKGKVFFHTVTEVTGYVGFLSFPLPIE 119
                D  +LL+D++KG + F T T V G +G   F +P++
Sbjct: 176 FEVIYDAFYLLEDIAKGVIPFDTDTRVEGKLGLFFFTVPLK 216