Miyakogusa Predicted Gene

Lj3g3v2284470.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2284470.1 tr|B9GFP4|B9GFP4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_548840 PE=4
SV=1,73.99,0,SOR_SNZ,Vitamin B6 biosynthesis protein; no
description,Aldolase-type TIM barrel; SUBFAMILY NOT NAME,CUFF.43865.1
         (302 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g29700.1                                                       384   e-107
Glyma15g09350.1                                                       383   e-106

>Glyma13g29700.1 
          Length = 311

 Score =  384 bits (987), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 184/299 (61%), Positives = 229/299 (76%), Gaps = 14/299 (4%)

Query: 7   GAVTLYNTTVITDPKQNPYSFKLGAVQTLRGGAILQVSTPHQAKIAEQAGACAITVSDPL 66
           G VT+Y    IT+ K++P+S K+G  Q LRGG I+ V    QA+IAE+AGACA+   + +
Sbjct: 7   GVVTVYGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMALERV 66

Query: 67  ------RPAISRMTDPSLIKDIKRTVSIPILSRARVGHFVEAQILESTGVDYIDESEILS 120
                 +  ++RM+DP LIKDIKR V+IP++++AR+GHFVEAQILE+ G+DY+DESE+L+
Sbjct: 67  PADIRAQGGVARMSDPQLIKDIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLT 126

Query: 121 PADDHNHINKHNFRCPFVCGARTLGEALRRIREGAAMVRIQGDLSGSGNIAETVKNVRSV 180
            ADD NHINKHNFR PFVCG R LGEALRRIREGAAM+R +G+ +G+GNI E V++VRSV
Sbjct: 127 LADDANHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGE-AGTGNIIEAVRHVRSV 185

Query: 181 MGELRALSNMDEDEVFAFAKKIEAPYDLVAQTKQMGRLPVVHFAAGGIVTPADAALMMQL 240
           M ++R L NMD+DEVF FAK I APYDLV QTKQ+GRLPVVHFAAGG+ TPADAALMMQL
Sbjct: 186 MSDIRVLRNMDDDEVFTFAKSIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALMMQL 245

Query: 241 GCHGVFVGSEVFNCEDPFKRVRGIIQAVRNYNDPHVLV-------ESMANLNLGDDMIE 292
           GC GVFVGS VF   DP KR R I+QAV +Y+DP VL        E+M  +NL DD +E
Sbjct: 246 GCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPEVLAEVSCGLGEAMVGINLTDDKVE 304


>Glyma15g09350.1 
          Length = 311

 Score =  383 bits (984), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 183/299 (61%), Positives = 229/299 (76%), Gaps = 14/299 (4%)

Query: 7   GAVTLYNTTVITDPKQNPYSFKLGAVQTLRGGAILQVSTPHQAKIAEQAGACAITVSDPL 66
           G VT+Y    IT+ K++P+S K+G  Q LRGG I+ V    QA+IAE+AGACA+   + +
Sbjct: 7   GVVTVYGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVDAEQARIAEEAGACAVMALERV 66

Query: 67  ------RPAISRMTDPSLIKDIKRTVSIPILSRARVGHFVEAQILESTGVDYIDESEILS 120
                 +  ++RM+DP LIKDIKR V+IP++++AR+GHFVEAQILE+ G+DY+DESE+L+
Sbjct: 67  PADIRAQGGVARMSDPQLIKDIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLT 126

Query: 121 PADDHNHINKHNFRCPFVCGARTLGEALRRIREGAAMVRIQGDLSGSGNIAETVKNVRSV 180
            ADD NHINKHNFR PFVCG R LGEALRRIREGAAM+R +G+ +G+GNI E V++VRSV
Sbjct: 127 LADDANHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGE-AGTGNIIEAVRHVRSV 185

Query: 181 MGELRALSNMDEDEVFAFAKKIEAPYDLVAQTKQMGRLPVVHFAAGGIVTPADAALMMQL 240
           M ++R L NMD+DEVF FAK I APYDLV QTKQ+GRLPVVHFAAGG+ TPADAALMMQL
Sbjct: 186 MSDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALMMQL 245

Query: 241 GCHGVFVGSEVFNCEDPFKRVRGIIQAVRNYNDPHVLV-------ESMANLNLGDDMIE 292
           GC GVFVGS VF   DP KR R I+QAV +Y+DP +L        E+M  +NL DD +E
Sbjct: 246 GCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPEILAEVSCGLGEAMVGINLTDDKVE 304