Miyakogusa Predicted Gene

Lj3g3v2248290.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2248290.2 Non Chatacterized Hit- tr|K4DF87|K4DF87_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,53.92,3e-19,seg,NULL,CUFF.43750.2
         (98 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g22150.2                                                       143   5e-35
Glyma08g22150.1                                                       143   5e-35
Glyma13g43710.1                                                       116   7e-27
Glyma07g03880.1                                                       114   3e-26
Glyma15g01650.1                                                       112   6e-26

>Glyma08g22150.2 
          Length = 611

 Score =  143 bits (360), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 73/102 (71%), Positives = 78/102 (76%), Gaps = 6/102 (5%)

Query: 1   MAFPGYVA----GSGKSEMTWLPVXXXXXXXXXXSYPYLAVDGAYTRQSGPTSAMGNSSK 56
           MAFPGYV     G GKSEMTWLPV          +YP+L VDGA +RQSG  SAMG SSK
Sbjct: 512 MAFPGYVGQPQLGLGKSEMTWLPVLAGPAGALGATYPFLPVDGASSRQSGQASAMGTSSK 571

Query: 57  EHNDVNKANNELKPPQKSELVSDEYGQRQNKPRRYSEMNFGQ 98
           EHND  KANNELKPPQ+SEL SDE+GQRQNKPRRYSEMNFGQ
Sbjct: 572 EHND--KANNELKPPQRSELASDEFGQRQNKPRRYSEMNFGQ 611


>Glyma08g22150.1 
          Length = 611

 Score =  143 bits (360), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 73/102 (71%), Positives = 78/102 (76%), Gaps = 6/102 (5%)

Query: 1   MAFPGYVA----GSGKSEMTWLPVXXXXXXXXXXSYPYLAVDGAYTRQSGPTSAMGNSSK 56
           MAFPGYV     G GKSEMTWLPV          +YP+L VDGA +RQSG  SAMG SSK
Sbjct: 512 MAFPGYVGQPQLGLGKSEMTWLPVLAGPAGALGATYPFLPVDGASSRQSGQASAMGTSSK 571

Query: 57  EHNDVNKANNELKPPQKSELVSDEYGQRQNKPRRYSEMNFGQ 98
           EHND  KANNELKPPQ+SEL SDE+GQRQNKPRRYSEMNFGQ
Sbjct: 572 EHND--KANNELKPPQRSELASDEFGQRQNKPRRYSEMNFGQ 611


>Glyma13g43710.1 
          Length = 606

 Score =  116 bits (290), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 74/111 (66%), Gaps = 14/111 (12%)

Query: 1   MAFPGYVA----GSGKSEMTWLPVXXXXXXXXXXSY--------PYLAVDGAY-TRQSGP 47
           MAFPGYV     G G SEMTWLPV          +         PYL VDGAY  RQSG 
Sbjct: 497 MAFPGYVGQPQLGLGNSEMTWLPVLTGAAGALGAAGALGATYCPPYLTVDGAYHARQSGQ 556

Query: 48  TSAMGNSSKEHNDVNKANNELKPPQKSELVSDEYGQRQNKPRRYSEMNFGQ 98
           TSA   SSKE N+VNKANNE K PQKSE V+DE+GQRQNKPRRYSEMNFGQ
Sbjct: 557 TSATPISSKE-NNVNKANNEWKSPQKSEPVNDEFGQRQNKPRRYSEMNFGQ 606


>Glyma07g03880.1 
          Length = 650

 Score =  114 bits (284), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/94 (63%), Positives = 68/94 (72%), Gaps = 5/94 (5%)

Query: 1   MAFPGYVA----GSGKSEMTWLPVXXXXXXXXXXSYPYLAVDGAYTRQSGPTSAMGNSSK 56
           MAFPGYVA    G GKSEMTWLPV          +YP+L VDGA  +QSG  SA+G SSK
Sbjct: 550 MAFPGYVAQPQLGLGKSEMTWLPVLAGSAGALGATYPFLPVDGASNQQSGQASALGTSSK 609

Query: 57  EHNDVNKANNELKPPQKSELVSDEYGQRQNKPRR 90
           EHN V+K N+ELKPPQ+SEL SDE+ Q QNKPRR
Sbjct: 610 EHN-VDKDNHELKPPQRSELASDEFEQWQNKPRR 642


>Glyma15g01650.1 
          Length = 639

 Score =  112 bits (281), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 63/96 (65%), Positives = 68/96 (70%), Gaps = 7/96 (7%)

Query: 1   MAFPGYVA----GSGKSEMTWLPVXXXXXXXXXXSY--PYLAVDGAYTRQSGPTSAMGNS 54
           MAFPGYVA    G G SEMTWLPV          +Y  PYL VDG + RQSG TSA   S
Sbjct: 526 MAFPGYVAQPQLGLGNSEMTWLPVLTGAAGALGATYCPPYLTVDGYHARQSGQTSATSTS 585

Query: 55  SKEHNDVNKANNELKPPQKSELVSDEYGQRQNKPRR 90
           SKE N+VNKANNE KPPQKSE V+DE+GQRQNKPRR
Sbjct: 586 SKE-NNVNKANNEWKPPQKSEPVNDEFGQRQNKPRR 620