Miyakogusa Predicted Gene

Lj3g3v2235780.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2235780.1 Non Chatacterized Hit- tr|I1KVB3|I1KVB3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,83.93,0,CRYPTOCHROME,NULL; seg,NULL; Cryptochrome/photolyase,
N-terminal domain,DNA photolyase, N-terminal; ,CUFF.43695.1
         (276 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g22400.1                                                       347   8e-96
Glyma10g32390.2                                                        61   1e-09
Glyma10g32390.1                                                        61   1e-09
Glyma20g35220.1                                                        60   3e-09
Glyma04g11010.1                                                        53   3e-07
Glyma02g00830.1                                                        52   8e-07

>Glyma08g22400.1 
          Length = 545

 Score =  347 bits (890), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 170/224 (75%), Positives = 188/224 (83%)

Query: 25  WFRKGLRIHDNPALEFASRGASNLYPVFVIDPHYMKPDPYASSPGSSRAGLNRINFXXXX 84
           WFRKGLRIHDNPALE ASRGAS+LYPVFVIDPH+M+PDP +S+PGSSRAGLNRI F    
Sbjct: 21  WFRKGLRIHDNPALEVASRGASHLYPVFVIDPHFMEPDPNSSAPGSSRAGLNRIKFLLEC 80

Query: 85  XXXXXXXXKKLGSRLLILKGDPAEVLIQCLKQWNVKKLCFEYDTEPYYQALDIKVKSFAV 144
                   K LGSRLLILKGDPAEV+I+CLK+ +VKKLCFEYDTEPYYQALD+KVK+FA+
Sbjct: 81  LVDLDLNLKNLGSRLLILKGDPAEVVIRCLKELHVKKLCFEYDTEPYYQALDVKVKNFAL 140

Query: 145 AAGIEVFSPVSHTLFNPMDIIQKNGGKPPLSYQSFVKLAGDXXXXXXXXXXXXXXVGHLG 204
           AAGIEVFSPVSHTLFNP DII+KNGGKPPLSYQSFVKLAG+              VG+LG
Sbjct: 141 AAGIEVFSPVSHTLFNPTDIIEKNGGKPPLSYQSFVKLAGEPPSSLSTVYSSLPPVGNLG 200

Query: 205 GCDIFEVPTVEDLGYEDAKQDEFSPFKGGESEALKRLEECMKDK 248
            CDI EVPT+ DLGY DA+QDEFSPFKGGESEALKRL+ECMKDK
Sbjct: 201 SCDISEVPTIRDLGYGDAEQDEFSPFKGGESEALKRLDECMKDK 244


>Glyma10g32390.2 
          Length = 634

 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 11/149 (7%)

Query: 22  SVVWFRKGLRIHDNPALEFASRGASNLYPVFVIDPHYMKPDPYASSPGSSRAGLNRINFX 81
           ++VWFR+ LRI DNPAL  A++  S L PV+V  P            G    G     + 
Sbjct: 6   TIVWFRRDLRIEDNPALTAAAKEGSVL-PVYVWCP---------KEEGQFYPGRVSRWWL 55

Query: 82  XXXXXXXXXXXKKLGSRLLILKGDPAEV-LIQCLKQWNVKKLCFEYDTEPYYQALDIKVK 140
                      K LGSRL+++K     V L++C+K     K+ F +  +P     D  +K
Sbjct: 56  KQSLAHLDQSLKSLGSRLVLIKTHSTAVALVECVKAIQATKVVFNHLYDPVSLVRDHNIK 115

Query: 141 SFAVAAGIEVFSPVSHTLFNPMDIIQKNG 169
              V  GI V S     L+ P ++  ++G
Sbjct: 116 EKLVEQGISVQSYNGDLLYEPWEVNSESG 144


>Glyma10g32390.1 
          Length = 634

 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 11/149 (7%)

Query: 22  SVVWFRKGLRIHDNPALEFASRGASNLYPVFVIDPHYMKPDPYASSPGSSRAGLNRINFX 81
           ++VWFR+ LRI DNPAL  A++  S L PV+V  P            G    G     + 
Sbjct: 6   TIVWFRRDLRIEDNPALTAAAKEGSVL-PVYVWCP---------KEEGQFYPGRVSRWWL 55

Query: 82  XXXXXXXXXXXKKLGSRLLILKGDPAEV-LIQCLKQWNVKKLCFEYDTEPYYQALDIKVK 140
                      K LGSRL+++K     V L++C+K     K+ F +  +P     D  +K
Sbjct: 56  KQSLAHLDQSLKSLGSRLVLIKTHSTAVALVECVKAIQATKVVFNHLYDPVSLVRDHNIK 115

Query: 141 SFAVAAGIEVFSPVSHTLFNPMDIIQKNG 169
              V  GI V S     L+ P ++  ++G
Sbjct: 116 EKLVEQGISVQSYNGDLLYEPWEVNSESG 144


>Glyma20g35220.1 
          Length = 634

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 11/149 (7%)

Query: 22  SVVWFRKGLRIHDNPALEFASRGASNLYPVFVIDPHYMKPDPYASSPGSSRAGLNRINFX 81
           ++VWFR+ LRI DNPAL  A++  S L PV++  P            G    G     + 
Sbjct: 6   TIVWFRRDLRIEDNPALAAAAKEGSVL-PVYIWCP---------KEEGQFYPGRVSRWWL 55

Query: 82  XXXXXXXXXXXKKLGSRLLILKG-DPAEVLIQCLKQWNVKKLCFEYDTEPYYQALDIKVK 140
                      K LGSRL+++K       L++C+K     K+ F +  +P     D  +K
Sbjct: 56  KQSLAHLDQSLKSLGSRLVLIKTHSTVTALVECVKAIQATKVVFNHLYDPVSLVRDHNIK 115

Query: 141 SFAVAAGIEVFSPVSHTLFNPMDIIQKNG 169
              V  GI V S     L+ P ++  ++G
Sbjct: 116 EKLVEQGISVQSYNGDLLYEPWEVYSESG 144


>Glyma04g11010.1 
          Length = 681

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 12/164 (7%)

Query: 17  ASGSGSVVWFRKGLRIHDNPALEFASRGASNLYPVFVIDPHYMKPDPYASSPGSSRAGLN 76
           + G GS+VWFR+ LRI DNPAL    R A  +  VFV  P            G    G  
Sbjct: 2   SGGGGSIVWFRRDLRIEDNPALTAGVR-AGAVVAVFVWAPE---------EEGQYYPGRV 51

Query: 77  RINFXXXXXXXXXXXXKKLGSRLLILKG-DPAEVLIQCLKQWNVKKLCFEYDTEPYYQAL 135
              +            + LG+ L+  +  D    L++ +K     +L F +  +P     
Sbjct: 52  SRWWLKNSLAHLHSSLRNLGTPLITKRSTDTLSSLLEVVKSTGATQLFFNHLYDPLSLVR 111

Query: 136 DIKVKSFAVAAGIEVFSPVSHTLFNPMDIIQKNGGKPPLSYQSF 179
           D + K    A GI V S  +  L+ P ++   + G+P  ++ +F
Sbjct: 112 DHRAKEVLTAQGITVRSFNADLLYEPWEVNDAH-GRPFTTFAAF 154


>Glyma02g00830.1 
          Length = 612

 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 11/150 (7%)

Query: 22  SVVWFRKGLRIHDNPALEFASRGAS-NLYPVFVIDPHYMKPDPYASSPGSSRAGLNRINF 80
           ++VWFR+ LRI DNPAL  A+     +++PV++  P            G    G     +
Sbjct: 4   TIVWFRRDLRIEDNPALAAAAAAKDGSVFPVYIWCP---------KEEGQFYPGRVSRWW 54

Query: 81  XXXXXXXXXXXXKKLGSRLLILKGDPA-EVLIQCLKQWNVKKLCFEYDTEPYYQALDIKV 139
                       K LG+ L+++K D   E L++C+      K+ F +  +P     D  +
Sbjct: 55  LKQSLAHLDKSLKSLGAELMLIKTDSTLEALLECVNAIQATKVVFNHLYDPVSLVRDHNI 114

Query: 140 KSFAVAAGIEVFSPVSHTLFNPMDIIQKNG 169
           K   V  GI V S     LF P  I  + G
Sbjct: 115 KEKLVELGISVKSYNGDLLFEPWSIYDETG 144