Miyakogusa Predicted Gene

Lj3g3v2235770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2235770.1 Non Chatacterized Hit- tr|K3XTZ7|K3XTZ7_SETIT
Uncharacterized protein OS=Setaria italica GN=Si005404,75.93,7e-19,no
description,Cytochrome c oxidase, subunit Vb;
Q8LBW7_ARATH_Q8LBW7;,Cytochrome c oxidase, subunit ,CUFF.43703.1
         (153 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g22410.1                                                       214   2e-56
Glyma07g03680.1                                                       206   9e-54
Glyma07g03680.4                                                       200   5e-52
Glyma13g43980.2                                                       200   5e-52
Glyma15g01360.1                                                       199   6e-52
Glyma07g03680.2                                                       199   9e-52
Glyma13g43980.1                                                       198   2e-51
Glyma08g22410.2                                                       154   4e-38
Glyma15g01360.2                                                       152   9e-38
Glyma07g03680.3                                                       141   3e-34

>Glyma08g22410.1 
          Length = 160

 Score =  214 bits (546), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 111/145 (76%), Positives = 118/145 (81%), Gaps = 7/145 (4%)

Query: 1   MWRRLLSSHLKTLATCSPQSVSTVAALNCSSVSLL---RHFS----DTTSIKKKVEDVMP 53
           M RRLLSSHLKTLA  +  S    A+      +L    R+FS    D T+IKKKVEDVMP
Sbjct: 1   MLRRLLSSHLKTLAATASSSTPRSASAAARFAALSRSSRYFSTQSEDATAIKKKVEDVMP 60

Query: 54  IATGHEREELQANLEGRDILEINHPVGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDV 113
           IATGHEREELQA LEGR+ILEI+HP GPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDV
Sbjct: 61  IATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDV 120

Query: 114 VWFWLEKGKPHECPVCAQYFVLEVV 138
           VWFWLEK KPHECPVCAQYFVLEVV
Sbjct: 121 VWFWLEKDKPHECPVCAQYFVLEVV 145


>Glyma07g03680.1 
          Length = 163

 Score =  206 bits (524), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 113/149 (75%), Positives = 121/149 (81%), Gaps = 12/149 (8%)

Query: 1   MWRRLLSSHLKTLATCS-------PQSVSTVAALNCSSVSLLRHFS----DTTSIKKKVE 49
           M RRLLSSHLKTLA+ +       P+S S  A     S S L +FS    D T+IKKKVE
Sbjct: 1   MLRRLLSSHLKTLASSAAAAATATPRSASASARFAALSRSCL-YFSTQSEDATAIKKKVE 59

Query: 50  DVMPIATGHEREELQANLEGRDILEINHPVGPFGTKEAPAVVKSYYDKRIVGCPGGEGED 109
           D+MPIATGHEREELQA LEGR+ILEI+HP GPFGTKEAPAVVKSYYDKRIVGCPGGEGED
Sbjct: 60  DIMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGED 119

Query: 110 EHDVVWFWLEKGKPHECPVCAQYFVLEVV 138
           EHDVVWFWLEK KPHECPVCAQYFVLEVV
Sbjct: 120 EHDVVWFWLEKDKPHECPVCAQYFVLEVV 148


>Glyma07g03680.4 
          Length = 147

 Score =  200 bits (509), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 109/146 (74%), Positives = 118/146 (80%), Gaps = 12/146 (8%)

Query: 1   MWRRLLSSHLKTLATCS-------PQSVSTVAALNCSSVSLLRHFS----DTTSIKKKVE 49
           M RRLLSSHLKTLA+ +       P+S S  A     S S L +FS    D T+IKKKVE
Sbjct: 1   MLRRLLSSHLKTLASSAAAAATATPRSASASARFAALSRSCL-YFSTQSEDATAIKKKVE 59

Query: 50  DVMPIATGHEREELQANLEGRDILEINHPVGPFGTKEAPAVVKSYYDKRIVGCPGGEGED 109
           D+MPIATGHEREELQA LEGR+ILEI+HP GPFGTKEAPAVVKSYYDKRIVGCPGGEGED
Sbjct: 60  DIMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGED 119

Query: 110 EHDVVWFWLEKGKPHECPVCAQYFVL 135
           EHDVVWFWLEK KPHECPVCAQYFV+
Sbjct: 120 EHDVVWFWLEKDKPHECPVCAQYFVV 145


>Glyma13g43980.2 
          Length = 153

 Score =  200 bits (508), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 103/142 (72%), Positives = 114/142 (80%), Gaps = 8/142 (5%)

Query: 1   MWRRLLSS-HLKTLATCSPQSVSTVAALNCSSVSLLRHF---SDTTSIKKKVEDVMPIAT 56
           MWRRL SS +LK L T    S   +AA       L RHF   S  +S+KK+VEDV+PIAT
Sbjct: 1   MWRRLFSSSNLKALHTTLSPSRPRLAAQTL----LARHFTAQSGASSLKKRVEDVVPIAT 56

Query: 57  GHEREELQANLEGRDILEINHPVGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDVVWF 116
           GHEREE+QA+LEGRDILEINHPVGPFGTKEAPAVVKSY+D+RIVGCPG EGE EHDVVWF
Sbjct: 57  GHEREEIQADLEGRDILEINHPVGPFGTKEAPAVVKSYFDRRIVGCPGDEGEGEHDVVWF 116

Query: 117 WLEKGKPHECPVCAQYFVLEVV 138
           WLEKGKP ECPVC+QYF LEVV
Sbjct: 117 WLEKGKPIECPVCSQYFKLEVV 138


>Glyma15g01360.1 
          Length = 152

 Score =  199 bits (507), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 101/140 (72%), Positives = 114/140 (81%), Gaps = 5/140 (3%)

Query: 1   MWRRLLSS-HLKTLATC-SPQSVSTVAALNCSSVSLLRHFSDTTSIKKKVEDVMPIATGH 58
           MWRRL SS +LK+L T  SP      A L    V+     S  +S+K++VEDV+PIATGH
Sbjct: 1   MWRRLFSSSNLKSLHTALSPSRPRLAAPLLTRHVTA---HSGASSVKRRVEDVVPIATGH 57

Query: 59  EREELQANLEGRDILEINHPVGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWL 118
           EREE+QA+LEGRDILEINHPVGPFGTKEAPAVVKSY+D+RIVGCPG EGEDEHDVVWFWL
Sbjct: 58  EREEIQADLEGRDILEINHPVGPFGTKEAPAVVKSYFDRRIVGCPGDEGEDEHDVVWFWL 117

Query: 119 EKGKPHECPVCAQYFVLEVV 138
           EKGKP ECPVC+QYF LEVV
Sbjct: 118 EKGKPKECPVCSQYFKLEVV 137


>Glyma07g03680.2 
          Length = 162

 Score =  199 bits (506), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 112/149 (75%), Positives = 120/149 (80%), Gaps = 13/149 (8%)

Query: 1   MWRRLLSSHLKTLATCS-------PQSVSTVAALNCSSVSLLRHFS----DTTSIKKKVE 49
           M RRLLSSHLKTLA+ +       P+S S  A     S S L +FS    D T+IKKKVE
Sbjct: 1   MLRRLLSSHLKTLASSAAAAATATPRSASASARFAALSRSCL-YFSTQSEDATAIKKKVE 59

Query: 50  DVMPIATGHEREELQANLEGRDILEINHPVGPFGTKEAPAVVKSYYDKRIVGCPGGEGED 109
           D+MPIATGHEREELQA LEGR+ILEI+HP GPFGTKEAPAVVKSYYDKRIVGCPGGE ED
Sbjct: 60  DIMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGE-ED 118

Query: 110 EHDVVWFWLEKGKPHECPVCAQYFVLEVV 138
           EHDVVWFWLEK KPHECPVCAQYFVLEVV
Sbjct: 119 EHDVVWFWLEKDKPHECPVCAQYFVLEVV 147


>Glyma13g43980.1 
          Length = 179

 Score =  198 bits (503), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 106/164 (64%), Positives = 118/164 (71%), Gaps = 26/164 (15%)

Query: 1   MWRRLLSS-HLKTLATCSPQSVSTVAA----------------------LNCS---SVSL 34
           MWRRL SS +LK L T    S   +AA                      LNCS   S+S 
Sbjct: 1   MWRRLFSSSNLKALHTTLSPSRPRLAAQTLLARHFTAQSGFPSLHFPYILNCSFLNSISF 60

Query: 35  LRHFSDTTSIKKKVEDVMPIATGHEREELQANLEGRDILEINHPVGPFGTKEAPAVVKSY 94
           L   S  +S+KK+VEDV+PIATGHEREE+QA+LEGRDILEINHPVGPFGTKEAPAVVKSY
Sbjct: 61  LLSQSGASSLKKRVEDVVPIATGHEREEIQADLEGRDILEINHPVGPFGTKEAPAVVKSY 120

Query: 95  YDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCAQYFVLEVV 138
           +D+RIVGCPG EGE EHDVVWFWLEKGKP ECPVC+QYF LEVV
Sbjct: 121 FDRRIVGCPGDEGEGEHDVVWFWLEKGKPIECPVCSQYFKLEVV 164


>Glyma08g22410.2 
          Length = 124

 Score =  154 bits (388), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 82/123 (66%), Positives = 92/123 (74%), Gaps = 7/123 (5%)

Query: 1   MWRRLLSSHLKTLATCSPQSVSTVAALNCSSVSLL---RHFS----DTTSIKKKVEDVMP 53
           M RRLLSSHLKTLA  +  S    A+      +L    R+FS    D T+IKKKVEDVMP
Sbjct: 1   MLRRLLSSHLKTLAATASSSTPRSASAAARFAALSRSSRYFSTQSEDATAIKKKVEDVMP 60

Query: 54  IATGHEREELQANLEGRDILEINHPVGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDV 113
           IATGHEREELQA LEGR+ILEI+HP GPFGTKEAPAVVKSYYDKRIVGCPGGEG +  ++
Sbjct: 61  IATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGGEYQNI 120

Query: 114 VWF 116
             F
Sbjct: 121 PCF 123


>Glyma15g01360.2 
          Length = 135

 Score =  152 bits (385), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 84/140 (60%), Positives = 97/140 (69%), Gaps = 22/140 (15%)

Query: 1   MWRRLLSS-HLKTLATC-SPQSVSTVAALNCSSVSLLRHFSDTTSIKKKVEDVMPIATGH 58
           MWRRL SS +LK+L T  SP      A L    V+     S  +S+K++VEDV+PIATGH
Sbjct: 1   MWRRLFSSSNLKSLHTALSPSRPRLAAPLLTRHVTA---HSGASSVKRRVEDVVPIATGH 57

Query: 59  EREELQANLEGRDILEINHPVGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWL 118
           EREE+QA+LE                 EAPAVVKSY+D+RIVGCPG EGEDEHDVVWFWL
Sbjct: 58  EREEIQADLE-----------------EAPAVVKSYFDRRIVGCPGDEGEDEHDVVWFWL 100

Query: 119 EKGKPHECPVCAQYFVLEVV 138
           EKGKP ECPVC+QYF LEVV
Sbjct: 101 EKGKPKECPVCSQYFKLEVV 120


>Glyma07g03680.3 
          Length = 148

 Score =  141 bits (355), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/118 (70%), Positives = 91/118 (77%), Gaps = 12/118 (10%)

Query: 1   MWRRLLSSHLKTLATCS-------PQSVSTVAALNCSSVSLLRHFS----DTTSIKKKVE 49
           M RRLLSSHLKTLA+ +       P+S S  A     S S L +FS    D T+IKKKVE
Sbjct: 1   MLRRLLSSHLKTLASSAAAAATATPRSASASARFAALSRSCL-YFSTQSEDATAIKKKVE 59

Query: 50  DVMPIATGHEREELQANLEGRDILEINHPVGPFGTKEAPAVVKSYYDKRIVGCPGGEG 107
           D+MPIATGHEREELQA LEGR+ILEI+HP GPFGTKEAPAVVKSYYDKRIVGCPGGEG
Sbjct: 60  DIMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEG 117