Miyakogusa Predicted Gene

Lj3g3v2225730.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2225730.1 Non Chatacterized Hit- tr|I1PXJ7|I1PXJ7_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,45.61,4e-19,coiled-coil,NULL; LATE EMBRYOGENESIS ABUNDANT
PROTEIN, PUTATIVE / LEA PROTEIN, PUTATIVE,NULL; LATE E,CUFF.43689.1
         (164 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g44020.1                                                       112   2e-25
Glyma07g03640.1                                                        79   2e-15
Glyma10g26440.1                                                        52   3e-07
Glyma15g01320.1                                                        50   1e-06
Glyma20g20880.1                                                        49   2e-06

>Glyma13g44020.1 
          Length = 140

 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/145 (46%), Positives = 80/145 (55%), Gaps = 11/145 (7%)

Query: 1   MASHDQSYRAGETMGRTEEKGNQMMGNIGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MASH QSY AG+T GRTEEK NQ MGNIGE                              
Sbjct: 1   MASHRQSYEAGQTKGRTEEKTNQTMGNIGEKAQAAKEKTQEMAQAAKEKTQQTAQAAKDK 60

Query: 61  XXXXXXXXXXXXXXXXHSTGDRTQQTAQAGKQRASEMGQATRESAQAGNDNTGGFMQQTG 120
                            +  ++TQQ   A +Q+ SEMGQ+T+ESAQ+G DNT GF+QQTG
Sbjct: 61  TCDTS-----------QAAKEKTQQNTGAAQQKTSEMGQSTKESAQSGKDNTQGFLQQTG 109

Query: 121 EKVKDMAQGATEAVKSTLGMGQKDE 145
           EKVK  AQGATEAVK TLG+G+ D+
Sbjct: 110 EKVKGAAQGATEAVKQTLGLGEHDQ 134


>Glyma07g03640.1 
          Length = 94

 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/62 (62%), Positives = 50/62 (80%)

Query: 77  HSTGDRTQQTAQAGKQRASEMGQATRESAQAGNDNTGGFMQQTGEKVKDMAQGATEAVKS 136
           HS  ++ Q+ +   K++ASEMGQ T+E+AQ+G  NTGGF+QQTGEKVK+MAQGATEAVK 
Sbjct: 32  HSVNEKAQEKSGQTKEKASEMGQFTKEAAQSGKQNTGGFLQQTGEKVKEMAQGATEAVKQ 91

Query: 137 TL 138
           T 
Sbjct: 92  TF 93


>Glyma10g26440.1 
          Length = 88

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 34/43 (79%)

Query: 101 TRESAQAGNDNTGGFMQQTGEKVKDMAQGATEAVKSTLGMGQK 143
           T ++AQ   D + GF+QQTGE+VK+MAQGA ++VK TLGM +K
Sbjct: 46  TGQTAQQNKDESAGFLQQTGEQVKNMAQGAVDSVKHTLGMDKK 88


>Glyma15g01320.1 
          Length = 101

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/30 (80%), Positives = 25/30 (83%)

Query: 1  MASHDQSYRAGETMGRTEEKGNQMMGNIGE 30
          MASH QSY AG+T GRTEEK NQMMGN GE
Sbjct: 1  MASHRQSYEAGQTKGRTEEKTNQMMGNNGE 30


>Glyma20g20880.1 
          Length = 88

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 33/43 (76%)

Query: 101 TRESAQAGNDNTGGFMQQTGEKVKDMAQGATEAVKSTLGMGQK 143
           T ++ Q   + + GF+QQTGE+VK+MAQGA ++VK TLGM +K
Sbjct: 46  TGQTVQQNKEESAGFLQQTGEQVKNMAQGAVDSVKHTLGMDKK 88