Miyakogusa Predicted Gene
- Lj3g3v2224720.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2224720.1 tr|I0Z1Q0|I0Z1Q0_9CHLO tRNA-guanine
transglycosylase OS=Coccomyxa subellipsoidea C-169 PE=4
SV=1,38.99,6e-19,ZF_RANBP2_2,Zinc finger, RanBP2-type;
ZF_RANBP2_1,Zinc finger, RanBP2-type; ZINC FINGER
PROTEIN,NULL,CUFF.43714.1
(150 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g22470.1 186 7e-48
Glyma07g03620.1 184 2e-47
Glyma04g07270.1 148 2e-36
Glyma04g07270.3 148 2e-36
Glyma04g07270.2 148 2e-36
Glyma06g07350.2 144 4e-35
Glyma06g07350.1 144 4e-35
Glyma06g24770.1 108 3e-24
Glyma17g12580.1 100 8e-22
Glyma05g08430.1 99 2e-21
Glyma05g08440.1 97 8e-21
Glyma02g35480.1 77 7e-15
Glyma17g12570.1 71 5e-13
>Glyma08g22470.1
Length = 146
Score = 186 bits (472), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 105/150 (70%), Positives = 105/150 (70%), Gaps = 6/150 (4%)
Query: 1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXXVRPG 60
MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKY VRPG
Sbjct: 1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRVVDFGGFGGRGGSSFGLTGSD-VRPG 59
Query: 61 DWYCAAANCGAHNFASRSSCFKCGAFKDDLVGGF--SSDILRSRXXXXXXXXXXXXXXXX 118
DWYCAAANCGAHNFASRSSCFKCGAFKDDL GG SSDILRSR
Sbjct: 60 DWYCAAANCGAHNFASRSSCFKCGAFKDDLAGGGYNSSDILRSR---AFGGSGRPGWKSG 116
Query: 119 DWICSRSGCNEHNFASRMECFKCSAPRDTY 148
DWICSRSGCNEHNFASRMECFKCSAPRDTY
Sbjct: 117 DWICSRSGCNEHNFASRMECFKCSAPRDTY 146
>Glyma07g03620.1
Length = 144
Score = 184 bits (468), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/149 (68%), Positives = 105/149 (70%), Gaps = 6/149 (4%)
Query: 1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXXVRPG 60
MSRPGDWNCRSCQHLNFQRRDSCQRCGD+KY VRPG
Sbjct: 1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDAKYGDRVDFGGFGGRGGSSFGLTGSD--VRPG 58
Query: 61 DWYCAAANCGAHNFASRSSCFKCGAFKDDLVGGF-SSDILRSRXXXXXXXXXXXXXXXXD 119
DWYCAAANCGAHNFASRSSCFKCGAFKDDL G + SSDILRSR D
Sbjct: 59 DWYCAAANCGAHNFASRSSCFKCGAFKDDLAGSYNSSDILRSR---AFGGSGRPGWKSGD 115
Query: 120 WICSRSGCNEHNFASRMECFKCSAPRDTY 148
WIC+RSGCNEHNFASRMECFKCSAPRDTY
Sbjct: 116 WICTRSGCNEHNFASRMECFKCSAPRDTY 144
>Glyma04g07270.1
Length = 171
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 92/149 (61%), Gaps = 3/149 (2%)
Query: 1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXX-VRP 59
MSRPGDWNCR+C HLNFQRR+SCQRCG+ + VRP
Sbjct: 13 MSRPGDWNCRTCNHLNFQRRESCQRCGEPRSGGGGDYGGGFGGGRGSSSFGFTTGPDVRP 72
Query: 60 GDWYCAAANCGAHNFASRSSCFKCGAFKDD-LVGGFSSDILRSRXXXXXXXXXXXXX-XX 117
GDWYC NCGAHNFASRSSCFKCGA K+D G F +D+ R R
Sbjct: 73 GDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAGPFDADMPRMRPYGFGGGSSARPGWKS 132
Query: 118 XDWICSRSGCNEHNFASRMECFKCSAPRD 146
DWIC+RSGCNEHNFA+RMEC++C+APRD
Sbjct: 133 GDWICTRSGCNEHNFANRMECYRCNAPRD 161
>Glyma04g07270.3
Length = 159
Score = 148 bits (373), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 92/149 (61%), Gaps = 3/149 (2%)
Query: 1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXX-VRP 59
MSRPGDWNCR+C HLNFQRR+SCQRCG+ + VRP
Sbjct: 1 MSRPGDWNCRTCNHLNFQRRESCQRCGEPRSGGGGDYGGGFGGGRGSSSFGFTTGPDVRP 60
Query: 60 GDWYCAAANCGAHNFASRSSCFKCGAFKDD-LVGGFSSDILRSRXXXXXXXXXXXXX-XX 117
GDWYC NCGAHNFASRSSCFKCGA K+D G F +D+ R R
Sbjct: 61 GDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAGPFDADMPRMRPYGFGGGSSARPGWKS 120
Query: 118 XDWICSRSGCNEHNFASRMECFKCSAPRD 146
DWIC+RSGCNEHNFA+RMEC++C+APRD
Sbjct: 121 GDWICTRSGCNEHNFANRMECYRCNAPRD 149
>Glyma04g07270.2
Length = 159
Score = 148 bits (373), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 92/149 (61%), Gaps = 3/149 (2%)
Query: 1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXX-VRP 59
MSRPGDWNCR+C HLNFQRR+SCQRCG+ + VRP
Sbjct: 1 MSRPGDWNCRTCNHLNFQRRESCQRCGEPRSGGGGDYGGGFGGGRGSSSFGFTTGPDVRP 60
Query: 60 GDWYCAAANCGAHNFASRSSCFKCGAFKDD-LVGGFSSDILRSRXXXXXXXXXXXXX-XX 117
GDWYC NCGAHNFASRSSCFKCGA K+D G F +D+ R R
Sbjct: 61 GDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAGPFDADMPRMRPYGFGGGSSARPGWKS 120
Query: 118 XDWICSRSGCNEHNFASRMECFKCSAPRD 146
DWIC+RSGCNEHNFA+RMEC++C+APRD
Sbjct: 121 GDWICTRSGCNEHNFANRMECYRCNAPRD 149
>Glyma06g07350.2
Length = 163
Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/153 (51%), Positives = 91/153 (59%), Gaps = 7/153 (4%)
Query: 1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXX-VRP 59
M+RPGDWNCR+C HLNFQRR+SCQRCG+ + VRP
Sbjct: 1 MNRPGDWNCRTCNHLNFQRRESCQRCGEPRSGGGDYGGGFGGGRGSSSFGGFTTGPDVRP 60
Query: 60 GDWYCAAANCGAHNFASRSSCFKCGAFKDD-LVGGFSSDILRSRXXXXXXXXXXXXXX-- 116
GDWYC NCGAHNFASRSSCFKCGA K+D G F D+ R R
Sbjct: 61 GDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAGPFDVDMPRMRPFGFGGSGGGGSSARP 120
Query: 117 ---XXDWICSRSGCNEHNFASRMECFKCSAPRD 146
DWIC+RSGCNEHNFA+RMEC++C+APRD
Sbjct: 121 GWKSGDWICTRSGCNEHNFANRMECYRCNAPRD 153
>Glyma06g07350.1
Length = 163
Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/153 (51%), Positives = 91/153 (59%), Gaps = 7/153 (4%)
Query: 1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXX-VRP 59
M+RPGDWNCR+C HLNFQRR+SCQRCG+ + VRP
Sbjct: 1 MNRPGDWNCRTCNHLNFQRRESCQRCGEPRSGGGDYGGGFGGGRGSSSFGGFTTGPDVRP 60
Query: 60 GDWYCAAANCGAHNFASRSSCFKCGAFKDD-LVGGFSSDILRSRXXXXXXXXXXXXXX-- 116
GDWYC NCGAHNFASRSSCFKCGA K+D G F D+ R R
Sbjct: 61 GDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAGPFDVDMPRMRPFGFGGSGGGGSSARP 120
Query: 117 ---XXDWICSRSGCNEHNFASRMECFKCSAPRD 146
DWIC+RSGCNEHNFA+RMEC++C+APRD
Sbjct: 121 GWKSGDWICTRSGCNEHNFANRMECYRCNAPRD 153
>Glyma06g24770.1
Length = 140
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 75/152 (49%), Gaps = 32/152 (21%)
Query: 5 GDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXXVRPGDWYC 64
GDW C +CQH+NF++RD+CQ C K+ GDWYC
Sbjct: 6 GDWMCGACQHINFKKRDACQSCAYPKFGGPDPTTYRYNSTE-----------TLAGDWYC 54
Query: 65 AAANCGAHNFASRSSCFKCGAFKD----------DLVGGFSSDILRSRXXXXXXXXXXXX 114
A NCGAHNFASRSSCF+CGA KD D GG+ SD
Sbjct: 55 TAMNCGAHNFASRSSCFRCGALKDGYSCRFGGNMDGSGGYGSDC-----------NYPPG 103
Query: 115 XXXXDWICSRSGCNEHNFASRMECFKCSAPRD 146
DWIC+R GC HN+A+R ECFKC PR+
Sbjct: 104 WKTGDWICTRIGCGVHNYANRTECFKCKTPRN 135
>Glyma17g12580.1
Length = 127
Score = 100 bits (248), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 71/143 (49%), Gaps = 27/143 (18%)
Query: 5 GDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXXVRPGDWYC 64
GDW C C+H+NF++R++CQ CG KY GDW+C
Sbjct: 6 GDWMCGVCEHINFKKREACQSCGYPKYGGHDPSTYRYNKTE-----------ALAGDWFC 54
Query: 65 AAANCGAHNFASRSSCFKCGAFKDDLVGG-FSSDILRSRXXXXXXXXXXXXXXXXDWICS 123
NCGAHN+ASRSSC++CGA KD G + SD DW+C
Sbjct: 55 ---NCGAHNYASRSSCYRCGAIKDYYSSGEYGSDTFPP------------GWKNGDWLCP 99
Query: 124 RSGCNEHNFASRMECFKCSAPRD 146
R GC HN+ASR ECFKC PRD
Sbjct: 100 RIGCGVHNYASRTECFKCKVPRD 122
>Glyma05g08430.1
Length = 133
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 5 GDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXXVRPGDWYC 64
GDW C C+H+NF++R++CQ C KY GDW+C
Sbjct: 6 GDWMCGVCEHINFKKRETCQSCRYPKYGGTDPSTYRYNKTE-----------ALAGDWFC 54
Query: 65 AAANCGAHNFASRSSCFKCGAFKDDLVGGFSSDILRSRXXXXXXXXXXXXXXXXDWICSR 124
NCGAHN+ASRSSC++CGA KD G+ + + DW+C R
Sbjct: 55 ---NCGAHNYASRSSCYRCGAIKDYYCSGYGT-----KSGEYGSYTFPLGWKNGDWLCPR 106
Query: 125 SGCNEHNFASRMECFKCSAPRD 146
GC HN+ASR ECFKC PRD
Sbjct: 107 IGCGVHNYASRTECFKCKVPRD 128
>Glyma05g08440.1
Length = 133
Score = 96.7 bits (239), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 71/142 (50%), Gaps = 19/142 (13%)
Query: 5 GDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXXVRPGDWYC 64
GDW C C+H+NF++R++CQ CG KY PGDW+C
Sbjct: 6 GDWMCGVCEHINFKKREACQSCGYPKYGGPDPSTYRYNRTE-----------ALPGDWFC 54
Query: 65 AAANCGAHNFASRSSCFKCGAFKDDLVGGFSSDILRSRXXXXXXXXXXXXXXXXDWICSR 124
NCGAHN+A+RSSC++CG+ KDD S + DW+C R
Sbjct: 55 ---NCGAHNYANRSSCYRCGSMKDD-----YSSGYGNNSGGYGSDTFPPGWKTGDWLCPR 106
Query: 125 SGCNEHNFASRMECFKCSAPRD 146
GC HN+ASR EC+KC PRD
Sbjct: 107 HGCGVHNYASRTECYKCKMPRD 128
>Glyma02g35480.1
Length = 111
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 64/137 (46%), Gaps = 32/137 (23%)
Query: 5 GDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXXVRPGDWYC 64
GDW C C+H+NF++R++CQ C KY GDW+C
Sbjct: 6 GDWMCGVCEHINFKKRETCQSCRYPKYGGTDPSTYRYNKTE-----------ALAGDWFC 54
Query: 65 AAANCGAHNFASRSSCFKCGAFKDDLVGGFSSDILRSRXXXXXXXXXXXXXXXXDWICSR 124
NCGAHN+ SRSSC++CGA KD + LR R + ++
Sbjct: 55 ---NCGAHNYVSRSSCYRCGAIKD-----YYCAYLRWRIRAMP-------------VNTQ 93
Query: 125 SGCNEHNFASRMECFKC 141
GC HN+ASR ECFKC
Sbjct: 94 IGCGVHNYASRTECFKC 110
>Glyma17g12570.1
Length = 209
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 14/85 (16%)
Query: 5 GDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXXVRPGDWYC 64
GDW C C+H+NF++R++CQ CG KY GDW+C
Sbjct: 6 GDWMCGVCEHINFKKREACQSCGYPKYGGPDPSTYRYNRTEALA-----------GDWFC 54
Query: 65 AAANCGAHNFASRSSCFKCGAFKDD 89
NCGAHNFASRS+CF+CG+ KDD
Sbjct: 55 ---NCGAHNFASRSNCFRCGSMKDD 76