Miyakogusa Predicted Gene

Lj3g3v2214670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2214670.1 Non Chatacterized Hit- tr|I1NC79|I1NC79_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.17876
PE,80.39,5e-18,TruD,Pseudouridine synthase, TruD; TRUD,Pseudouridine
synthase, TruD, insertion domain; Pseudouridin,CUFF.43684.1
         (53 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g43270.1                                                        95   1e-20
Glyma03g40600.1                                                        94   3e-20

>Glyma19g43270.1 
          Length = 691

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/51 (80%), Positives = 44/51 (86%)

Query: 1   MMYVHSYQSYLWNHAASTRVQKYGTEQVVLGDLVYCKENPSGNVRELIGPE 51
           M+YVHSYQSYLWNHAAS RVQKYGTE VVLGDLVYCKEN +G V E +G E
Sbjct: 410 MLYVHSYQSYLWNHAASKRVQKYGTENVVLGDLVYCKENSTGKVTEFVGSE 460


>Glyma03g40600.1 
          Length = 635

 Score = 94.0 bits (232), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/51 (80%), Positives = 44/51 (86%)

Query: 1   MMYVHSYQSYLWNHAASTRVQKYGTEQVVLGDLVYCKENPSGNVRELIGPE 51
           M+YVHSYQSYLWNHAAS RVQKYGTE VVLGDLVYCKEN +G V E +G E
Sbjct: 409 MLYVHSYQSYLWNHAASKRVQKYGTENVVLGDLVYCKENSTGKVTESVGSE 459