Miyakogusa Predicted Gene

Lj3g3v2213630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2213630.1 tr|Q9SSC1|Q9SSC1_ARATH At1g80180/F18B13_26
OS=Arabidopsis thaliana GN=F18B13.26 PE=2 SV=1,46.43,4e-19,
,CUFF.43680.1
         (109 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g03580.1                                                       147   2e-36
Glyma08g22510.1                                                       135   7e-33
Glyma13g44080.2                                                       129   7e-31
Glyma13g44080.1                                                       129   7e-31
Glyma15g01260.1                                                       114   3e-26
Glyma17g12500.1                                                        94   3e-20
Glyma13g23760.1                                                        84   3e-17

>Glyma07g03580.1 
          Length = 109

 Score =  147 bits (372), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/110 (70%), Positives = 91/110 (82%), Gaps = 2/110 (1%)

Query: 1   MAGLQRSEVSFRRQGSSGLVWDEKLLSGELNRKEEGQDNKGSTDHQNVKELRTTTVQRSR 60
           MAGLQRSEVSFRRQGSSGLVWD+KLLSGELN+ E+ +   G   + N+    T  +QRSR
Sbjct: 1   MAGLQRSEVSFRRQGSSGLVWDDKLLSGELNKNEDPKGAHGGDLNLNLNVRTTPPIQRSR 60

Query: 61  SNGGYRTGRVSPAIDPPSPKLSACGFCAAFGKPTGDKGQRSKP-GKPRTR 109
           SNGGYRTG+VSPAI+PPSPKLSACGFC+AFGK TG+KG+R+KP  K R+R
Sbjct: 61  SNGGYRTGKVSPAIEPPSPKLSACGFCSAFGK-TGEKGRRAKPRAKHRSR 109


>Glyma08g22510.1 
          Length = 109

 Score =  135 bits (341), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 71/97 (73%), Positives = 79/97 (81%), Gaps = 5/97 (5%)

Query: 1  MAGLQRSEVSFRRQGSSGLVWDEKLLSGELNRKEEGQDNKG--STDHQNVKELRT---TT 55
          M GLQRSEVSFRRQGSSGLVWD+KLLSGELN+    +D KG  S    N+K   T   TT
Sbjct: 1  MDGLQRSEVSFRRQGSSGLVWDDKLLSGELNKVNNNEDQKGGGSGGDLNLKVRTTPPNTT 60

Query: 56 VQRSRSNGGYRTGRVSPAIDPPSPKLSACGFCAAFGK 92
          +QRSRSNGGYRTG+VSPAI+PPSPKLSACGFC+AFGK
Sbjct: 61 IQRSRSNGGYRTGKVSPAIEPPSPKLSACGFCSAFGK 97


>Glyma13g44080.2 
          Length = 115

 Score =  129 bits (324), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 69/115 (60%), Positives = 87/115 (75%), Gaps = 6/115 (5%)

Query: 1   MAGLQRSEVSFRRQGSSGLVWDEKLLSGELNRKEEGQDNK--GSTDHQNVKELRTTTV-Q 57
           MAGLQRS VSFRRQGSSG VWD++ LS ELN+ +E Q+N   G  + + + +++TT   +
Sbjct: 1   MAGLQRSAVSFRRQGSSGFVWDDRFLSEELNKVKEDQNNNNDGGPEIKELHQVQTTPPPE 60

Query: 58  RSRSNGG---YRTGRVSPAIDPPSPKLSACGFCAAFGKPTGDKGQRSKPGKPRTR 109
           R+RSNGG   YRTG+VSPAI+PPSP+LSACGFCAAFGK   +K QR+ P K R R
Sbjct: 61  RTRSNGGARGYRTGKVSPAIEPPSPRLSACGFCAAFGKAGDNKPQRTTPAKHRPR 115


>Glyma13g44080.1 
          Length = 115

 Score =  129 bits (324), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 69/115 (60%), Positives = 87/115 (75%), Gaps = 6/115 (5%)

Query: 1   MAGLQRSEVSFRRQGSSGLVWDEKLLSGELNRKEEGQDNK--GSTDHQNVKELRTTTV-Q 57
           MAGLQRS VSFRRQGSSG VWD++ LS ELN+ +E Q+N   G  + + + +++TT   +
Sbjct: 1   MAGLQRSAVSFRRQGSSGFVWDDRFLSEELNKVKEDQNNNNDGGPEIKELHQVQTTPPPE 60

Query: 58  RSRSNGG---YRTGRVSPAIDPPSPKLSACGFCAAFGKPTGDKGQRSKPGKPRTR 109
           R+RSNGG   YRTG+VSPAI+PPSP+LSACGFCAAFGK   +K QR+ P K R R
Sbjct: 61  RTRSNGGARGYRTGKVSPAIEPPSPRLSACGFCAAFGKAGDNKPQRTTPAKHRPR 115


>Glyma15g01260.1 
          Length = 134

 Score =  114 bits (285), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/113 (59%), Positives = 80/113 (70%), Gaps = 12/113 (10%)

Query: 1   MAGLQRSEVSFRRQGSSGLVWDEKLLSGELNRKEEGQDNKGSTDHQ-----NVKELRTTT 55
           MAGLQRS VSFRRQGSSG VWD++ L  ELN+ +E  +N  + DH       +KEL+  T
Sbjct: 1   MAGLQRSAVSFRRQGSSGFVWDDRFLQEELNKVKEDHNNNNNHDHDNDDGGEIKELQVQT 60

Query: 56  ---VQRSRSNG---GYRTGRVSPAIDPPSPKLSACGFCAAFGKPTGDKGQRSK 102
              +QR RSNG   GYRTG+VSPAI+PPSP+LSACGFCAAFGK  GD   R +
Sbjct: 61  TPPLQRIRSNGGARGYRTGKVSPAIEPPSPRLSACGFCAAFGK-AGDNKHRPR 112


>Glyma17g12500.1 
          Length = 99

 Score = 94.0 bits (232), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 53/105 (50%), Positives = 67/105 (63%), Gaps = 13/105 (12%)

Query: 1   MAGLQRSEVSFRRQGSSGLVWDEKLLSGELNRKEEGQDNKGSTDHQNVKELRTTTVQRSR 60
           M  LQRS  SFRRQGSSGLVWD+K ++G  N+ ++   + GS          + ++QRSR
Sbjct: 1   MTELQRSVTSFRRQGSSGLVWDDKFIAGIENQNKQESGDDGS----------SPSLQRSR 50

Query: 61  SNGG--YRTGRVSP-AIDPPSPKLSACGFCAAFGKPTGDKGQRSK 102
           S G   YRT  V+P A+DPPSPKL+ CGFCA F KP   K  +SK
Sbjct: 51  SAGAPPYRTVNVAPQAMDPPSPKLATCGFCALFRKPVSAKPNKSK 95


>Glyma13g23760.1 
          Length = 91

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/105 (47%), Positives = 62/105 (59%), Gaps = 21/105 (20%)

Query: 1   MAGLQRSEVSFRRQGSSGLVWDEKLLSG--ELNRKEEGQDNKGSTDHQNVKELRTTTVQR 58
           M  LQRS  SFRRQGSSGLVWD+K ++G    N++E G  ++              T+QR
Sbjct: 1   MTELQRSVTSFRRQGSSGLVWDDKFIAGIENENKQESGDGSRA-------------TLQR 47

Query: 59  SRSNGGYRTGRVSP-AIDPPSPKLSACGFCAAFGKPTGDKGQRSK 102
                 YRT  V+P A+DPPSPKL+ CGFCA F KP   K  +SK
Sbjct: 48  P-----YRTVNVAPQAMDPPSPKLATCGFCALFRKPVSAKPTKSK 87