Miyakogusa Predicted Gene
- Lj3g3v2213520.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2213520.1 Non Chatacterized Hit- tr|J3L103|J3L103_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G2,74.14,3e-16,PDEFORMYLASE,Formylmethionine deformylase;
Pep_deformylase,Peptide deformylase; no description,Pepti,CUFF.43679.1
(261 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g22520.1 396 e-110
Glyma15g01240.1 305 4e-83
Glyma08g22520.2 195 4e-50
Glyma10g27560.1 188 5e-48
Glyma07g03570.1 124 7e-29
Glyma19g14000.2 87 1e-17
Glyma19g14000.1 87 2e-17
Glyma19g29310.3 86 3e-17
Glyma19g29310.2 86 3e-17
>Glyma08g22520.1
Length = 252
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/262 (75%), Positives = 214/262 (81%), Gaps = 11/262 (4%)
Query: 1 MEALHMQRVLPISAAQNT-LFTRPTATPLSGVAMXXXXXXXXXXXXXXXXXXXXXXXXGW 59
MEALH+ RVL + +Q T +F R + TPLS +A GW
Sbjct: 1 MEALHLHRVLLMPVSQKTSIFLRASGTPLSTLA----------RPPLRWSSQTCSARAGW 50
Query: 60 FLGLTADNKKMKLPDTVKAGDPVLHEPAQEVNPSEIKSERVQKIIDDMIRVMRNAPGVGL 119
FLGL AD+KK LPDTVKAGDPVLHEPAQ+V+P+EIKSERVQKIIDDMI+VMR APGVGL
Sbjct: 51 FLGLGADSKKTNLPDTVKAGDPVLHEPAQDVDPNEIKSERVQKIIDDMIQVMRKAPGVGL 110
Query: 120 AAPQIGVPLRIIVVEDTKEYISYAPKEETKAQDRVPFDLLVILNPKLEKKSNRTALFFEG 179
AAPQIG+PLRIIV+EDTKEYISY KEE K QDR PFDLLVILNPKLEKK RTALFFEG
Sbjct: 111 AAPQIGIPLRIIVLEDTKEYISYVSKEEAKTQDRRPFDLLVILNPKLEKKGKRTALFFEG 170
Query: 180 CLSVDGFRAVVERHLDVEVTGLDRYGAPIKINASGWQARILQHECDHLDGTLYVDKMVPR 239
CLSVDGFRAVVERHLDVEVTGLDRYGAPIKI ASGWQARILQHECDHLDGTLYVDKM+PR
Sbjct: 171 CLSVDGFRAVVERHLDVEVTGLDRYGAPIKIIASGWQARILQHECDHLDGTLYVDKMLPR 230
Query: 240 TFRTVDNLNLPLGQGCPKLGPR 261
TFRTVDN++LPL QGCPKLGPR
Sbjct: 231 TFRTVDNMDLPLAQGCPKLGPR 252
>Glyma15g01240.1
Length = 223
Score = 305 bits (780), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 147/204 (72%), Positives = 162/204 (79%), Gaps = 8/204 (3%)
Query: 58 GWFLGLTADNKKMKLPDTVKAGDPVLHEPAQEVNPSEIKSERVQKIIDDMIRVMRNAPGV 117
GW G KL VKAG+ VLH A+EV EIKSERVQKIIDDM+RVMR APGV
Sbjct: 28 GWLAG--------KLAKIVKAGEAVLHSRAEEVEAIEIKSERVQKIIDDMVRVMRKAPGV 79
Query: 118 GLAAPQIGVPLRIIVVEDTKEYISYAPKEETKAQDRVPFDLLVILNPKLEKKSNRTALFF 177
GLAAPQIG+PLRIIV+ED +Y++Y +E KAQDR PFDLLVILNPKL+ + RTALFF
Sbjct: 80 GLAAPQIGIPLRIIVLEDKIQYMAYYSNQELKAQDRTPFDLLVILNPKLKNTTTRTALFF 139
Query: 178 EGCLSVDGFRAVVERHLDVEVTGLDRYGAPIKINASGWQARILQHECDHLDGTLYVDKMV 237
EGCLSV G+ AVVER+LDVEV G DRYG PIKINA+GWQARILQHECDHLDGTLYVDKMV
Sbjct: 140 EGCLSVPGYSAVVERYLDVEVAGFDRYGEPIKINATGWQARILQHECDHLDGTLYVDKMV 199
Query: 238 PRTFRTVDNLNLPLGQGCPKLGPR 261
PRTFR +N PL GCPKLGPR
Sbjct: 200 PRTFRAPENSYKPLAHGCPKLGPR 223
>Glyma08g22520.2
Length = 153
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/160 (64%), Positives = 116/160 (72%), Gaps = 11/160 (6%)
Query: 1 MEALHMQRVLPISAAQNT-LFTRPTATPLSGVAMXXXXXXXXXXXXXXXXXXXXXXXXGW 59
MEALH+ RVL + +Q T +F R + TPLS +A GW
Sbjct: 1 MEALHLHRVLLMPVSQKTSIFLRASGTPLSTLA----------RPPLRWSSQTCSARAGW 50
Query: 60 FLGLTADNKKMKLPDTVKAGDPVLHEPAQEVNPSEIKSERVQKIIDDMIRVMRNAPGVGL 119
FLGL AD+KK LPDTVKAGDPVLHEPAQ+V+P+EIKSERVQKIIDDMI+VMR APGVGL
Sbjct: 51 FLGLGADSKKTNLPDTVKAGDPVLHEPAQDVDPNEIKSERVQKIIDDMIQVMRKAPGVGL 110
Query: 120 AAPQIGVPLRIIVVEDTKEYISYAPKEETKAQDRVPFDLL 159
AAPQIG+PLRIIV+EDTKEYISY KEE K QDR PFDLL
Sbjct: 111 AAPQIGIPLRIIVLEDTKEYISYVSKEEAKTQDRRPFDLL 150
>Glyma10g27560.1
Length = 127
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/117 (79%), Positives = 100/117 (85%)
Query: 58 GWFLGLTADNKKMKLPDTVKAGDPVLHEPAQEVNPSEIKSERVQKIIDDMIRVMRNAPGV 117
GWFLGL A+NKK LPDTVK GDPVLHEPAQ+V+P EIK ERVQKIIDDMI+VMR A GV
Sbjct: 10 GWFLGLGANNKKTNLPDTVKVGDPVLHEPAQDVDPIEIKLERVQKIIDDMIQVMRKASGV 69
Query: 118 GLAAPQIGVPLRIIVVEDTKEYISYAPKEETKAQDRVPFDLLVILNPKLEKKSNRTA 174
GLAAPQIG+PLRIIV+EDTKEYISY KEE K QDR P DLLVILNPKL+KK R A
Sbjct: 70 GLAAPQIGIPLRIIVLEDTKEYISYVSKEEAKTQDRRPADLLVILNPKLDKKGKRIA 126
>Glyma07g03570.1
Length = 59
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 56/59 (94%), Positives = 58/59 (98%)
Query: 183 VDGFRAVVERHLDVEVTGLDRYGAPIKINASGWQARILQHECDHLDGTLYVDKMVPRTF 241
VDGFRAVVERHLD+EVTGLDRYG PIKINASGWQARILQHECDHLDGTLYVDKMVP+TF
Sbjct: 1 VDGFRAVVERHLDIEVTGLDRYGEPIKINASGWQARILQHECDHLDGTLYVDKMVPKTF 59
>Glyma19g14000.2
Length = 236
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 14/147 (9%)
Query: 98 ERVQKIIDDMIRVMRNAPGVGLAAPQIGVPLRIIVVEDTKEYISYAPKEETKAQDRVPFD 157
+ ++K++ +M VM G+GL+APQ+G+ ++++V E+ EE
Sbjct: 97 DSLKKLVHEMFDVMYKTDGIGLSAPQLGINVQLMVFNPVGEH---GEGEE---------- 143
Query: 158 LLVILNPKLEKKSNRTALFFEGCLSVDGFRAVVERHLDVEVTGLDRYGAPIKINASGWQA 217
+V++NP++ + S + LF EGCLS G A V+R V++ D G +N S A
Sbjct: 144 -IVLVNPRVSQYSKKLTLFNEGCLSFPGINADVKRPESVKIDARDINGTRFSVNLSDLPA 202
Query: 218 RILQHECDHLDGTLYVDKMVPRTFRTV 244
RI QHE DHL G L+ ++M ++
Sbjct: 203 RIFQHEFDHLQGILFFERMTEEVLDSI 229
>Glyma19g14000.1
Length = 267
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 14/147 (9%)
Query: 98 ERVQKIIDDMIRVMRNAPGVGLAAPQIGVPLRIIVVEDTKEYISYAPKEETKAQDRVPFD 157
+ ++K++ +M VM G+GL+APQ+G+ ++++V E+ EE
Sbjct: 97 DSLKKLVHEMFDVMYKTDGIGLSAPQLGINVQLMVFNPVGEH---GEGEE---------- 143
Query: 158 LLVILNPKLEKKSNRTALFFEGCLSVDGFRAVVERHLDVEVTGLDRYGAPIKINASGWQA 217
+V++NP++ + S + LF EGCLS G A V+R V++ D G +N S A
Sbjct: 144 -IVLVNPRVSQYSKKLTLFNEGCLSFPGINADVKRPESVKIDARDINGTRFSVNLSDLPA 202
Query: 218 RILQHECDHLDGTLYVDKMVPRTFRTV 244
RI QHE DHL G L+ ++M ++
Sbjct: 203 RIFQHEFDHLQGILFFERMTEEVLDSI 229
>Glyma19g29310.3
Length = 267
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Query: 98 ERVQKIIDDMIRVMRNAPGVGLAAPQIGVPLRIIVVEDTKEYISYAPKEETKAQDRVPFD 157
+ ++K++ +M VM G+GL+APQ+G+ ++++V E R +
Sbjct: 97 DSLKKLVHEMFDVMYKTDGIGLSAPQLGINVQLMVFNPVGE--------------RGEGE 142
Query: 158 LLVILNPKLEKKSNRTALFFEGCLSVDGFRAVVERHLDVEVTGLDRYGAPIKINASGWQA 217
+V++NP++ + S + LF EGCLS G A V+R V++ D G +N S A
Sbjct: 143 EIVLVNPRVSQYSKKLTLFNEGCLSFPGINADVKRPESVKIDARDINGTRFSVNLSDLPA 202
Query: 218 RILQHECDHLDGTLYVDKMV 237
RI QHE DHL G L+ ++M
Sbjct: 203 RIFQHEFDHLQGILFFERMT 222
>Glyma19g29310.2
Length = 267
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Query: 98 ERVQKIIDDMIRVMRNAPGVGLAAPQIGVPLRIIVVEDTKEYISYAPKEETKAQDRVPFD 157
+ ++K++ +M VM G+GL+APQ+G+ ++++V E R +
Sbjct: 97 DSLKKLVHEMFDVMYKTDGIGLSAPQLGINVQLMVFNPVGE--------------RGEGE 142
Query: 158 LLVILNPKLEKKSNRTALFFEGCLSVDGFRAVVERHLDVEVTGLDRYGAPIKINASGWQA 217
+V++NP++ + S + LF EGCLS G A V+R V++ D G +N S A
Sbjct: 143 EIVLVNPRVSQYSKKLTLFNEGCLSFPGINADVKRPESVKIDARDINGTRFSVNLSDLPA 202
Query: 218 RILQHECDHLDGTLYVDKMV 237
RI QHE DHL G L+ ++M
Sbjct: 203 RIFQHEFDHLQGILFFERMT 222