Miyakogusa Predicted Gene

Lj3g3v2188190.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2188190.1 Non Chatacterized Hit- tr|I1KMK9|I1KMK9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,68,0.000000000004, ,CUFF.43656.1
         (62 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g36270.1                                                        75   1e-14
Glyma02g08530.1                                                        50   5e-07
Glyma05g34470.1                                                        48   2e-06

>Glyma07g36270.1 
          Length = 701

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/50 (68%), Positives = 42/50 (84%)

Query: 1   MTPNSVTLSSMLPVLGEFGFFKSGMEVRAFTLRMGIEFDIFIANSMIDIF 50
           M PNSVT+SSMLPVLGE G FK GMEV  F+L+M IE D+FI+NS+ID++
Sbjct: 242 MRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMY 291



 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 32/49 (65%)

Query: 2   TPNSVTLSSMLPVLGEFGFFKSGMEVRAFTLRMGIEFDIFIANSMIDIF 50
           TPN+VT +++LP     GF   G E+ A  +R+G   D+F++N++ D++
Sbjct: 344 TPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMY 392


>Glyma02g08530.1 
          Length = 493

 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 33/50 (66%)

Query: 1   MTPNSVTLSSMLPVLGEFGFFKSGMEVRAFTLRMGIEFDIFIANSMIDIF 50
           + PN VT+ ++LP  G  GF K G E+  F  R G + ++FIA+++ID++
Sbjct: 250 IQPNQVTVVALLPACGSAGFVKWGREIHGFICRKGFDGNVFIASALIDMY 299


>Glyma05g34470.1 
          Length = 611

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/50 (38%), Positives = 32/50 (64%)

Query: 1   MTPNSVTLSSMLPVLGEFGFFKSGMEVRAFTLRMGIEFDIFIANSMIDIF 50
           + P+S TLSS+LP+  E      G E+  + +R G + D+FI +S+ID++
Sbjct: 138 LRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMY 187