Miyakogusa Predicted Gene

Lj3g3v2188170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2188170.1 Non Chatacterized Hit- tr|G7JGZ0|G7JGZ0_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,70.73,1e-17,seg,NULL,CUFF.43654.1
         (116 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g22650.1                                                        94   3e-20

>Glyma08g22650.1 
          Length = 124

 Score = 94.0 bits (232), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/124 (45%), Positives = 63/124 (50%), Gaps = 8/124 (6%)

Query: 1   MKCHQMALLSVTTTNXXXXXXXXXXXXXXXXX-XXQIPFQPISRSSP-------AHXXXX 52
           MKC +MAL+SVTT N                       FQP+S SS         H    
Sbjct: 1   MKCLEMALVSVTTANSSKHILLRTLSRSHAFSFSLHRQFQPLSSSSAVLRRLPRCHAASP 60

Query: 53  XXXXXXXXXXXXXXXXXXXXXXSLSKLQDRVQIFFAVLFWMSLFFWASAWDGRNRPNKGS 112
                                 SLSK+QDR+QIFFAVLFWMSLFFWASAWDGRNRP+KGS
Sbjct: 61  GPPLPPSENDSSRHLKGADVATSLSKIQDRIQIFFAVLFWMSLFFWASAWDGRNRPDKGS 120

Query: 113 RFRR 116
           RFRR
Sbjct: 121 RFRR 124