Miyakogusa Predicted Gene
- Lj3g3v2184850.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2184850.1 Non Chatacterized Hit- tr|F6HYM4|F6HYM4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,31.31,0.0000004,seg,NULL,CUFF.43844.1
(522 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g03250.1 543 e-154
Glyma08g22850.1 517 e-146
Glyma04g24430.1 57 5e-08
Glyma06g30000.1 55 2e-07
>Glyma07g03250.1
Length = 1636
Score = 543 bits (1400), Expect = e-154, Method: Compositional matrix adjust.
Identities = 310/558 (55%), Positives = 368/558 (65%), Gaps = 73/558 (13%)
Query: 4 RRKGVQRIVPVSDNNCEEHVDTVADEDILFDNSNDAKTTGEGNIEEKNGTRDSEELKENG 63
R++ +I+ SDNN +EH + +ADE ILFDNS DA + +G IEE NG DS+ K+NG
Sbjct: 1113 RKQRRTKILSTSDNNSQEHDEAIADETILFDNSKDALSMIQGKIEETNGKLDSQVQKQNG 1172
Query: 64 DLTRYTPVTSEVVYETSSDEGWKEASSKGRSANAANRKFARRQRPHLSKLSINGSDRGI- 122
D T A +F +R R HLSKLSINGS+ I
Sbjct: 1173 DFT-----------------------------GLARSQF-KRARHHLSKLSINGSNNYIY 1202
Query: 123 ---SYRNDIASPLEKGAPKVIAGMSSPSRQSKARNLSLKEDSVNKQTKALLSKNXXXXXX 179
S RN+I SP ++G PKV+ MSSPSRQSK+RNL+L EDSVN TKA +SK
Sbjct: 1203 REGSSRNEITSPPQRGVPKVMLDMSSPSRQSKSRNLTLNEDSVNHSTKASVSK-ISSPAS 1261
Query: 180 XXXXXXXXXXYKEVAVAPPGTVLKPLLEKGEIERVSAENEICSSSSVMPLNEGSSQSSII 239
YKEVA+APPGTVLKPLLEK ++ERV+A +EIC + +V ++EGS QSSI
Sbjct: 1262 LSSLASKSISYKEVALAPPGTVLKPLLEKADMERVNAGDEICCNPAVTSISEGSCQSSIT 1321
Query: 240 NPVSQEDKSEGTCEIESQQENSEPELETVSLASDKAK-LAEANCSKLSAAAKPFNPGTLS 298
N V Q D++E T E E QQE+S ELE VS D+AK AE N SKLSAAAKPFNPG LS
Sbjct: 1322 NTVCQHDETEETHENEPQQESSGSELEKVS---DQAKSTAETNGSKLSAAAKPFNPGMLS 1378
Query: 299 LSHQLNSASFTTIYDANVSQAVLVEPVLPPAAARVPCGPRSPLYYRTNYAFRM------- 351
+SH LNSASFT++YD +VSQ + VE VLPPA ARVPCGPRSPLYYRTNY FRM
Sbjct: 1379 MSHHLNSASFTSMYDTDVSQGMHVETVLPPAVARVPCGPRSPLYYRTNYTFRMKHGSTKG 1438
Query: 352 ---VRERSGFGAPRIMNPHAPEFVPRGASQTETGD-----------------SEKNKLDD 391
+RERSGFG+PRIMNPHAPEFVPR ASQ E D SE+NKLD+
Sbjct: 1439 QTSIRERSGFGSPRIMNPHAPEFVPRNASQIEANDANSNVSNEHNSLSDIGMSEENKLDE 1498
Query: 392 -------XXXXXXXXXXXXXXXARQILLSFLVKSVHQNIDSTDESKVGDRKIENLGNSSD 444
ARQILLSFLVKSV +NIDS DESK G+ KIE L + SD
Sbjct: 1499 NFVEINGSSNKNSISESEKSEIARQILLSFLVKSVKENIDSVDESKDGEGKIEILESCSD 1558
Query: 445 DIAKENAVIKIKYGNEKKNKTVTHSRESEEQEKLDVTGKKDGDSEGFVVVTNKKKNRQKI 504
+IAK++AVI I YGNE+KNKTV HS +S+EQEKL VT KK+GD EGF+VV+ ++KNRQKI
Sbjct: 1559 EIAKDSAVINIMYGNEEKNKTVPHSSDSDEQEKLGVTEKKNGDGEGFIVVSKRRKNRQKI 1618
Query: 505 TNGVSELYNQQSICASVR 522
TNGV+ELYNQQSICASVR
Sbjct: 1619 TNGVTELYNQQSICASVR 1636
>Glyma08g22850.1
Length = 1550
Score = 517 bits (1331), Expect = e-146, Method: Compositional matrix adjust.
Identities = 277/455 (60%), Positives = 325/455 (71%), Gaps = 26/455 (5%)
Query: 68 YTPVTSEVVYETSSDEGWKEASSKGRSANAANRKFARRQRPHLSKLSINGSDRGI----S 123
Y PVTSE VYE SSDEGW+EA+SKGRS NAANRKF R+RPHLSKLS+NGS+ I S
Sbjct: 1103 YGPVTSEPVYEASSDEGWQEANSKGRSGNAANRKFGHRKRPHLSKLSVNGSNNYIYREGS 1162
Query: 124 YRNDIASPLEKGAPKVIAGMSSPSRQSKARNLSLKEDSVNKQTKALLSKNXXXXXXXXXX 183
RN+I SP ++G PKV+ MSSPSRQSK+RNL+L EDSVN TKA +SK
Sbjct: 1163 SRNEITSPPQRGVPKVMLDMSSPSRQSKSRNLTLNEDSVNHSTKASVSK--ISSPALSSL 1220
Query: 184 XXXXXXYKEVAVAPPGTVLKPLLEKGEIERVSAENEICSSSSVMPLNEGSSQSSIINPVS 243
YKEVA+APPGTVLKPLLEK E+++V+AE+EIC + +V +NEG+ QSSI N VS
Sbjct: 1221 ASKSISYKEVALAPPGTVLKPLLEKAEMDKVNAEDEICGNIAVTSINEGTCQSSITNTVS 1280
Query: 244 QEDKSEGTCEIESQQENSEPELETVSLASDKAKLAEANCSKLSAAAKPFNPGTLSLSHQL 303
Q D++E T EIE QQE+S ELE V ASD+ K E N SKLSAAAKPFNPG LS+SH L
Sbjct: 1281 QNDETEETHEIEPQQESSGSELEKVC-ASDQEKPTETNGSKLSAAAKPFNPGMLSMSHHL 1339
Query: 304 NSASFTTIYDANVSQAVLVEPVLPPAAARVPCGPRSPLYYRTNYAFRMVRERSGFGAPRI 363
NSASFT++YD +VSQ + VEPVLPPA ARVPCGPRSPLYYRTNY FRM ERSGFG+PRI
Sbjct: 1340 NSASFTSMYDTDVSQGMHVEPVLPPAVARVPCGPRSPLYYRTNYTFRMKHERSGFGSPRI 1399
Query: 364 MNPHAPEFVPRGASQTETGDSEKNKLDDXXXXXXXXXXXXXXXARQILLSFLVKSVHQNI 423
MNPHAPEF+PR ASQ E D+ N ++ ARQILLSFLVKSV +NI
Sbjct: 1400 MNPHAPEFIPRSASQIEAKDANSNVSNE--HNPFISESEKSEIARQILLSFLVKSVKENI 1457
Query: 424 DSTDESKVGDRKIENLGNSSDDIAKENAVIKIKYGNEKKNKTVTHSRESEEQEKLDVTGK 483
D DESK + KIENL + SD+I K+ AVI I E EKL VT
Sbjct: 1458 DYVDESKDDEGKIENLESCSDEITKDRAVINIIV----------------EPEKLGVTEN 1501
Query: 484 KDGDSEGFVVVTNKKKNRQKITNGVSELYNQQSIC 518
K+GD EGF+VV+ ++KNRQKITNGV+ELYNQ +C
Sbjct: 1502 KNGDGEGFIVVSKRRKNRQKITNGVTELYNQH-VC 1535
>Glyma04g24430.1
Length = 1817
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 51/111 (45%), Gaps = 23/111 (20%)
Query: 284 KLSAAAKPFNPGTLSLSHQLNSASFTTIYDANVSQAVLVEPVLP---------PAAARVP 334
KLSAAA PFNP T+ + + F + + V + P+LP A ARVP
Sbjct: 1539 KLSAAAPPFNPSTVPVFGSVTVPGFKD-HGGILPPPVNISPLLPVSPRRSPHQSATARVP 1597
Query: 335 CGPRSPLYYRTNYAFRMVRERSGF------------GAPRIMNPHAPEFVP 373
GPR Y Y R+ R ++ F PRIMNPHA EFVP
Sbjct: 1598 YGPRISGGY-NRYGNRVPRNKTVFLSGEPSPDGNPNSPPRIMNPHATEFVP 1647
>Glyma06g30000.1
Length = 1762
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 53/112 (47%), Gaps = 24/112 (21%)
Query: 284 KLSAAAKPFNPGTLSLSHQLNSASFTT---IYDANVSQAVLVEPVLPP-------AAARV 333
+LSAAA PFNP T+ + + F I ++ + L+ PV PP A ARV
Sbjct: 1486 RLSAAAPPFNPSTIPVFGSVPVPGFKDHGGILPPPLNISPLL-PVSPPRRSPHQSATARV 1544
Query: 334 PCGPRSPLYYRTNYAFRMVRERSGF------------GAPRIMNPHAPEFVP 373
P GPR Y Y R+ R ++ F PRIMNPHA EFVP
Sbjct: 1545 PYGPRISGGY-NRYGNRVPRNKTVFLSGEPSPDGNPNSPPRIMNPHATEFVP 1595