Miyakogusa Predicted Gene

Lj3g3v2174810.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2174810.1 Non Chatacterized Hit- tr|I1P8C0|I1P8C0_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,37.5,0.000000000006,seg,NULL,CUFF.43620.1
         (319 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g20920.1                                                       304   1e-82
Glyma07g01500.1                                                       216   2e-56

>Glyma08g20920.1 
          Length = 1184

 Score =  304 bits (778), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 175/316 (55%), Positives = 200/316 (63%), Gaps = 2/316 (0%)

Query: 1   MIHKQDSNAVSEKEIPAKTKNALRNTPGGKGNIGLKPIDLQGMLISLLKDKPIGMTLKSM 60
           M  KQD+NAVSEKEIP +T NA+RNTPGGKG  G KP+DLQGMLISLLKDKP GMTLK++
Sbjct: 286 MTGKQDTNAVSEKEIPTRTNNAMRNTPGGKGKNGSKPVDLQGMLISLLKDKPNGMTLKAL 345

Query: 61  VKVVGDTHPNSTXXXXXXXXXXXXXXXPGRYILRPEVDLANFKKPQTESGRSPEDSHNQI 120
            K VGD  PNS                PGRYIL+P  DL +  KPQTESG SP+D+H+QI
Sbjct: 346 EKAVGDPLPNSMKKIEPIIKKIAKYQAPGRYILKPGGDLESLNKPQTESGSSPDDNHSQI 405

Query: 121 PAREELHDQRSAPQGGGFEERVSNDNVGEVIVQVKSKGEEKLNPLKIIDAQHTSPDIVGE 180
           PAREE HDQ SAPQ G  EERV N ++ E +V+  SK EE+ N L+ +DAQHTSPDI+G+
Sbjct: 406 PAREEFHDQTSAPQEGS-EERVPNIDL-EEMVKENSKVEEESNTLEKVDAQHTSPDILGD 463

Query: 181 KKGSDQSEGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           KKGSD SEG                                                   
Sbjct: 464 KKGSDHSEGQAGSSSDSGSDTDSDSDSSDSGSDSGSHSRSRSRSPTGTGSGSSSDSESDA 523

Query: 241 XXXIKEGLEGSDEDVDILTSDDEKESKHKTEASDQRMSFPVPVKSPDRRSMLIEVDEKRD 300
               KEG EGSDE++DI+TSDDEKESK KTE SDQRM  P+PVKSPD RSM   VDEK+D
Sbjct: 524 SSSSKEGQEGSDEEIDIMTSDDEKESKQKTEVSDQRMPLPIPVKSPDGRSMQNVVDEKQD 583

Query: 301 ANESDAVEIEKDSPEE 316
            NESDAVEIEKD PEE
Sbjct: 584 GNESDAVEIEKDLPEE 599


>Glyma07g01500.1 
          Length = 1092

 Score =  216 bits (550), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/189 (61%), Positives = 138/189 (73%), Gaps = 2/189 (1%)

Query: 1   MIHKQDSNAVSEKEIPAKTKNALRNTPGGKGNIGLKPIDLQGMLISLLKDKPIGMTLKSM 60
           M  KQD+NAVSEKEIP +T NA+RNTPGGKG    KP+DLQ MLISLLKDKP GMTLK++
Sbjct: 264 MTGKQDTNAVSEKEIPTRTNNAMRNTPGGKGKNWSKPVDLQVMLISLLKDKPNGMTLKAL 323

Query: 61  VKVVGDTHPNSTXXXXXXXXXXXXXXXPGRYILRPEVDLANFKKPQTESGRSPEDSHNQI 120
            K VGDT PNS                PGRYIL+P VDL +  KPQTESG SP+D+H+QI
Sbjct: 324 EKAVGDTLPNSMKKIEPIIKKIAKYQAPGRYILKPGVDLESLNKPQTESGSSPDDNHSQI 383

Query: 121 PAREELHDQRSAPQGGGFEERVSNDNVGEVIVQVKSKGEEKLNPLKIIDAQHTSPDIVGE 180
            ARE+ +DQ S PQGG  EE+V N ++ E IV+  SK EE+ N L+ IDAQHTSPDI+G+
Sbjct: 384 LAREDFYDQTSGPQGGS-EEKVPNIDL-EGIVKENSKVEEESNNLEKIDAQHTSPDILGD 441

Query: 181 KKGSDQSEG 189
           KKGSD SEG
Sbjct: 442 KKGSDHSEG 450