Miyakogusa Predicted Gene

Lj3g3v2174800.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2174800.1 Non Chatacterized Hit- tr|C0PJC4|C0PJC4_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,60.32,0.00000000000003,seg,NULL,CUFF.43616.1
         (160 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g20920.1                                                       196   7e-51
Glyma07g01500.1                                                       185   2e-47

>Glyma08g20920.1 
          Length = 1184

 Score =  196 bits (499), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 102/158 (64%), Positives = 111/158 (70%), Gaps = 1/158 (0%)

Query: 1   MIIRLAPDLVDEIKRLEAQGLNARMKFDXXXXXXXXXIIDVGGKEFRFTWSREPGDLCDI 60
           MIIRLAPDLV+EI+R+EAQG  AR+KF          IIDVGGKEFRFTWS++ GDLCDI
Sbjct: 70  MIIRLAPDLVEEIRRVEAQGGTARVKFGPNPHNPTGNIIDVGGKEFRFTWSKD-GDLCDI 128

Query: 61  YEEPQSXXXXXXXXXXSGCAWRKLNVQRILDESAKKQVKMRSKEAELKHKSRKAIVLEPG 120
           YEE +S          SGCAWRKLNVQR+LDES K  VK RS+EAE K KSRKAIVLEPG
Sbjct: 129 YEEHRSRDDGNGLLVESGCAWRKLNVQRVLDESTKNHVKRRSEEAERKMKSRKAIVLEPG 188

Query: 121 NPHMKSQIKALAAVEATTWXXXXXXXXXXXXXXXVETL 158
           NP MKSQIKALAAVEAT W               VETL
Sbjct: 189 NPSMKSQIKALAAVEATPWKNYNKKKEAALKKRKVETL 226


>Glyma07g01500.1 
          Length = 1092

 Score =  185 bits (469), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 95/135 (70%), Positives = 104/135 (77%), Gaps = 1/135 (0%)

Query: 1   MIIRLAPDLVDEIKRLEAQGLNARMKFDXXXXXXXXXIIDVGGKEFRFTWSREPGDLCDI 60
           MIIRLAPDLV+EI+R+EAQG  AR+KF          IIDVGGKEFRFTWS++ GDLCDI
Sbjct: 72  MIIRLAPDLVEEIRRVEAQGGTARVKFGPNPHNPTGNIIDVGGKEFRFTWSKD-GDLCDI 130

Query: 61  YEEPQSXXXXXXXXXXSGCAWRKLNVQRILDESAKKQVKMRSKEAELKHKSRKAIVLEPG 120
           YEE +S          SGCAWRKLNVQR+LDES K  VK RS+EAE K KSRKAIVLEPG
Sbjct: 131 YEERRSGEDGNGLLVESGCAWRKLNVQRVLDESTKNHVKRRSEEAERKIKSRKAIVLEPG 190

Query: 121 NPHMKSQIKALAAVE 135
           NP MKSQIKALAAVE
Sbjct: 191 NPSMKSQIKALAAVE 205