Miyakogusa Predicted Gene

Lj3g3v2171540.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2171540.1 tr|C1E986|C1E986_MICSR 30S ribosomal protein S15
OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MICPU,43.48,2e-16,Ribosomal_S15,Ribosomal protein S15; S15/NS1
RNA-binding domain,S15/NS1, RNA-binding; seg,NULL; no d,CUFF.43599.1
         (199 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g03000.1                                                       240   6e-64
Glyma08g23110.1                                                        86   2e-17

>Glyma07g03000.1 
          Length = 391

 Score =  240 bits (613), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 113/152 (74%), Positives = 134/152 (88%), Gaps = 2/152 (1%)

Query: 21  GALSKIDKD--EKSKKPSLQRIDMLGLLGGTPDYLLKPPKEHLVEKYFHPDNLSSAEKLK 78
           G+L+++D++  E +KK S Q + +L  L GTP + L PPK HLVEKYFHPDN+SS+EKLK
Sbjct: 236 GSLAQLDQNQTEAAKKASRQGLSILSHLNGTPTFSLDPPKPHLVEKYFHPDNMSSSEKLK 295

Query: 79  IELTKVRDEFKMSESDCGSARVQVAQLTTKIKHLSSVLHKKDVHSRKGLVAMVQKRKSLL 138
           IEL KVRDEFKMS+SDCGSARVQ+AQLTTKIKHLS+VLHKKDVHSRKGL+AMVQ+RK LL
Sbjct: 296 IELAKVRDEFKMSDSDCGSARVQIAQLTTKIKHLSAVLHKKDVHSRKGLLAMVQRRKRLL 355

Query: 139 KYLRRTDWDSYCFVISKLGLRDNPDYSHKIRT 170
           KYLRRTDWDSYCFVISKLGLRDNPD+ ++ R+
Sbjct: 356 KYLRRTDWDSYCFVISKLGLRDNPDHIYRARS 387


>Glyma08g23110.1 
          Length = 224

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 52/68 (76%), Gaps = 1/68 (1%)

Query: 98  ARVQVAQLTTKIKHLSSVLHKKDVHSRKGLVAMVQKRKSLLKYLRRTDWDSYCFVISKLG 157
            R+    +T +I  +  + +  DVHS KGL+AMV++R+ LLKYL+RTDWDSYCFVISKL 
Sbjct: 158 VRIYSVNITDQICSMQ-LQYDPDVHSHKGLIAMVKRRRRLLKYLKRTDWDSYCFVISKLE 216

Query: 158 LRDNPDYS 165
           LRDNPD++
Sbjct: 217 LRDNPDHA 224