Miyakogusa Predicted Gene

Lj3g3v2168430.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2168430.2 tr|I3SEH4|I3SEH4_LOTJA 40S ribosomal protein S12
OS=Lotus japonicus PE=2 SV=1,99.29,0,Ribosomal_L7Ae,Ribosomal protein
L7Ae/L30e/S12e/Gadd45; RIBSOMALS12E,Ribosomal protein S12e;
seg,NUL,CUFF.43949.2
         (140 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g00610.1                                                       246   4e-66
Glyma13g44690.1                                                       246   4e-66
Glyma08g23260.3                                                       246   5e-66
Glyma08g23260.1                                                       246   5e-66
Glyma07g02720.2                                                       245   1e-65
Glyma07g02720.1                                                       245   1e-65
Glyma08g23260.2                                                       173   4e-44
Glyma02g35590.1                                                       131   2e-31
Glyma20g04310.1                                                       111   3e-25
Glyma08g29430.1                                                        83   9e-17
Glyma14g10250.1                                                        77   7e-15

>Glyma15g00610.1 
          Length = 141

 Score =  246 bits (629), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 120/122 (98%), Positives = 120/122 (98%)

Query: 19  IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAGQLCVLAEDCDQPDYVKLVK 78
           IPGEPMDIMTALQLVLRKS AYGGLARGLHEGAKVIEKHA QLCVLAEDCDQPDYVKLVK
Sbjct: 17  IPGEPMDIMTALQLVLRKSLAYGGLARGLHEGAKVIEKHAAQLCVLAEDCDQPDYVKLVK 76

Query: 79  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 138
           ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ
Sbjct: 77  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 136

Query: 139 HV 140
           HV
Sbjct: 137 HV 138


>Glyma13g44690.1 
          Length = 141

 Score =  246 bits (629), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 120/122 (98%), Positives = 120/122 (98%)

Query: 19  IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAGQLCVLAEDCDQPDYVKLVK 78
           IPGEPMDIMTALQLVLRKS AYGGLARGLHEGAKVIEKHA QLCVLAEDCDQPDYVKLVK
Sbjct: 17  IPGEPMDIMTALQLVLRKSLAYGGLARGLHEGAKVIEKHAAQLCVLAEDCDQPDYVKLVK 76

Query: 79  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 138
           ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ
Sbjct: 77  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 136

Query: 139 HV 140
           HV
Sbjct: 137 HV 138


>Glyma08g23260.3 
          Length = 140

 Score =  246 bits (628), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 120/122 (98%), Positives = 120/122 (98%)

Query: 19  IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAGQLCVLAEDCDQPDYVKLVK 78
           IPGEPMDIMTALQLVLRKS AYGGLARGLHEGAKVIEKHA QLCVLAEDCDQPDYVKLVK
Sbjct: 16  IPGEPMDIMTALQLVLRKSLAYGGLARGLHEGAKVIEKHAAQLCVLAEDCDQPDYVKLVK 75

Query: 79  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 138
           ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ
Sbjct: 76  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 135

Query: 139 HV 140
           HV
Sbjct: 136 HV 137


>Glyma08g23260.1 
          Length = 140

 Score =  246 bits (628), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 120/122 (98%), Positives = 120/122 (98%)

Query: 19  IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAGQLCVLAEDCDQPDYVKLVK 78
           IPGEPMDIMTALQLVLRKS AYGGLARGLHEGAKVIEKHA QLCVLAEDCDQPDYVKLVK
Sbjct: 16  IPGEPMDIMTALQLVLRKSLAYGGLARGLHEGAKVIEKHAAQLCVLAEDCDQPDYVKLVK 75

Query: 79  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 138
           ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ
Sbjct: 76  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 135

Query: 139 HV 140
           HV
Sbjct: 136 HV 137


>Glyma07g02720.2 
          Length = 143

 Score =  245 bits (625), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 122/140 (87%), Positives = 124/140 (88%)

Query: 1   MSGDXXXXXXXXXXXXXXIPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAGQ 60
           MSG+              IPGEPMDIMTALQLVLRKS AYGGL+RGLHEGAKVIEKHA Q
Sbjct: 1   MSGEEGVIAVEPAAAAAAIPGEPMDIMTALQLVLRKSLAYGGLSRGLHEGAKVIEKHAAQ 60

Query: 61  LCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSC 120
           LCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSC
Sbjct: 61  LCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSC 120

Query: 121 VVVKDFGEEHEAYNVVLQHV 140
           VVVKDFGEEHEAYNVVLQHV
Sbjct: 121 VVVKDFGEEHEAYNVVLQHV 140


>Glyma07g02720.1 
          Length = 143

 Score =  245 bits (625), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 122/140 (87%), Positives = 124/140 (88%)

Query: 1   MSGDXXXXXXXXXXXXXXIPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAGQ 60
           MSG+              IPGEPMDIMTALQLVLRKS AYGGL+RGLHEGAKVIEKHA Q
Sbjct: 1   MSGEEGVIAVEPAAAAAAIPGEPMDIMTALQLVLRKSLAYGGLSRGLHEGAKVIEKHAAQ 60

Query: 61  LCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSC 120
           LCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSC
Sbjct: 61  LCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSC 120

Query: 121 VVVKDFGEEHEAYNVVLQHV 140
           VVVKDFGEEHEAYNVVLQHV
Sbjct: 121 VVVKDFGEEHEAYNVVLQHV 140


>Glyma08g23260.2 
          Length = 109

 Score =  173 bits (439), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 85/91 (93%), Positives = 87/91 (95%)

Query: 19  IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAGQLCVLAEDCDQPDYVKLVK 78
           IPGEPMDIMTALQLVLRKS AYGGLARGLHEGAKVIEKHA QLCVLAEDCDQPDYVKLVK
Sbjct: 16  IPGEPMDIMTALQLVLRKSLAYGGLARGLHEGAKVIEKHAAQLCVLAEDCDQPDYVKLVK 75

Query: 79  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSE 109
           ALCAEHNVSLLTVPSAKTLGEWAG+  IDS+
Sbjct: 76  ALCAEHNVSLLTVPSAKTLGEWAGVSVIDSK 106


>Glyma02g35590.1 
          Length = 104

 Score =  131 bits (330), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/99 (71%), Positives = 75/99 (75%), Gaps = 12/99 (12%)

Query: 22  EPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAGQLCVLAEDCDQPDYVKLVKALC 81
           E +DIM ALQL+LRKS AY GLARGLHEGAK IEKH  QL +LA            KALC
Sbjct: 2   EIVDIMIALQLMLRKSLAYEGLARGLHEGAKGIEKHDVQLLILA------------KALC 49

Query: 82  AEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSC 120
           A+HNVSLL VP AKTLGEWA LCKIDSEGKARKV GCSC
Sbjct: 50  AKHNVSLLIVPGAKTLGEWASLCKIDSEGKARKVIGCSC 88


>Glyma20g04310.1 
          Length = 105

 Score =  111 bits (277), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 55/71 (77%), Positives = 58/71 (81%), Gaps = 2/71 (2%)

Query: 52  KVIEKHAGQLC--VLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSE 109
           KV +     LC  VLAEDCDQPDYVKL KALC EHNVSLLT+  AKTLG+WAGLCKIDSE
Sbjct: 10  KVQKGSRSMLCNYVLAEDCDQPDYVKLAKALCVEHNVSLLTILGAKTLGKWAGLCKIDSE 69

Query: 110 GKARKVTGCSC 120
           GKARKVTGC C
Sbjct: 70  GKARKVTGCFC 80


>Glyma08g29430.1 
          Length = 68

 Score = 83.2 bits (204), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 38/46 (82%), Positives = 41/46 (89%)

Query: 62  CVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKID 107
           CVLA+DCDQPDYVKL KALC +HNVSLLTVP AKTLGEWAG+  ID
Sbjct: 22  CVLAKDCDQPDYVKLAKALCVKHNVSLLTVPCAKTLGEWAGVSVID 67


>Glyma14g10250.1 
          Length = 81

 Score = 76.6 bits (187), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 36/38 (94%), Positives = 37/38 (97%)

Query: 103 LCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQHV 140
           LCKIDSEGKA+KVTGCS VVVKDFGEEHEAYNVVLQHV
Sbjct: 41  LCKIDSEGKAKKVTGCSGVVVKDFGEEHEAYNVVLQHV 78