Miyakogusa Predicted Gene

Lj3g3v2158380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2158380.1 Non Chatacterized Hit- tr|I1KGT8|I1KGT8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49303 PE,66.23,5e-16,
,CUFF.43946.1
         (97 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g02700.2                                                       113   5e-26
Glyma07g02700.1                                                        89   1e-18

>Glyma07g02700.2 
          Length = 710

 Score =  113 bits (282), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 64/97 (65%), Positives = 75/97 (77%), Gaps = 3/97 (3%)

Query: 1   MNVEVENREEARSSGQPEVKKRRRHDDATPNKGLNKSSAVKGPMAITESASKALSGVGET 60
           +N+E+EN EE+RSS Q +VKKRRR + ATPNKG+NKSSAVK    I ESASK L GV ET
Sbjct: 484 VNIELENIEESRSSAQTDVKKRRRLN-ATPNKGVNKSSAVK--ELIVESASKTLGGVKET 540

Query: 61  TQARLRRRNITTSVEVSESRDRSNSLVGSRIEVWWPK 97
            QA LRRR+IT +VE SES D  +SLV  RI+VWWPK
Sbjct: 541 PQASLRRRHITANVEASESCDDGSSLVCRRIKVWWPK 577


>Glyma07g02700.1 
          Length = 865

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/77 (66%), Positives = 60/77 (77%), Gaps = 3/77 (3%)

Query: 1   MNVEVENREEARSSGQPEVKKRRRHDDATPNKGLNKSSAVKGPMAITESASKALSGVGET 60
           +N+E+EN EE+RSS Q +VKKRRR + ATPNKG+NKSSAVK    I ESASK L GV ET
Sbjct: 791 VNIELENIEESRSSAQTDVKKRRRLN-ATPNKGVNKSSAVKE--LIVESASKTLGGVKET 847

Query: 61  TQARLRRRNITTSVEVS 77
            QA LRRR+IT +VEV 
Sbjct: 848 PQASLRRRHITANVEVC 864