Miyakogusa Predicted Gene

Lj3g3v2096000.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2096000.1 tr|B7FGJ2|B7FGJ2_MEDTR Ribosomal protein L34
OS=Medicago truncatula PE=2
SV=1,59.52,0.000000000000005,seg,NULL,83303_g.1
         (84 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g20450.1                                                        52   2e-07
Glyma07g01060.1                                                        49   1e-06

>Glyma08g20450.1 
          Length = 130

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 25/34 (73%), Gaps = 4/34 (11%)

Query: 49 SPQNDADSPSKLLASQGFLYPCGLPDLSFFLPQA 82
          SPQNDA+ P K    QGFLYPCGLP L FFLPQ 
Sbjct: 45 SPQNDAEFPHK----QGFLYPCGLPSLRFFLPQG 74


>Glyma07g01060.1 
          Length = 131

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 24/36 (66%), Gaps = 4/36 (11%)

Query: 49 SPQNDADSPSKLLASQGFLYPCGLPDLSFFLPQATV 84
          SPQNDA+ P     +QGFLYPCGLP L FFLP    
Sbjct: 46 SPQNDAEFPH----TQGFLYPCGLPSLRFFLPHGEA 77