Miyakogusa Predicted Gene

Lj3g3v2038710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2038710.1 CUFF.43468.1
         (271 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g00410.1                                                       365   e-101
Glyma08g24010.1                                                       229   3e-60
Glyma14g17350.1                                                       176   2e-44

>Glyma07g00410.1 
          Length = 276

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 185/240 (77%), Positives = 200/240 (83%), Gaps = 2/240 (0%)

Query: 34  RKMSLSMATAQAY-DSELENKKLQLLTSIQDTQRGLLTTPDQRFSIEEALVNVEGCNKGD 92
           R +SL     +AY DSELENKK  LLTS+QDTQRGLLTTPDQR  IEEALV++EGCN G 
Sbjct: 37  RSLSLVPCALKAYYDSELENKKHLLLTSVQDTQRGLLTTPDQRSCIEEALVSLEGCNIGS 96

Query: 93  -PINLNKLDGTWRLQYTSASDVLVLFEAAARLPFFQVGQIFQKFECRDESNGGVIRNVVR 151
            PINL+ LDGTWRLQYTSASDVL+L +AAA LPFFQVGQIFQKFECRD+SNGGVIRNVVR
Sbjct: 97  HPINLSNLDGTWRLQYTSASDVLILLQAAATLPFFQVGQIFQKFECRDQSNGGVIRNVVR 156

Query: 152 WSVPNLLEEQDGATLLVSAKFTVVSVRNIYLQFQEITLQDININEXXXXXXXXXXXXRSY 211
           WS+PNLLEEQ+GATLLVSAKF VVSVRNIYLQFQEIT+QDINI+E            RS+
Sbjct: 157 WSIPNLLEEQEGATLLVSAKFNVVSVRNIYLQFQEITIQDINISEELQALIAPAILPRSF 216

Query: 212 LSLQILQFLRAFKAQIPVRDPGRQSVGGLYYLSYLDDNMLLGRAXXXXXXXXXTRAQSLY 271
           +SLQILQFLR FKAQIPVRDPGRQSVGGLYYLSYLDDNMLLGRA         TRAQSLY
Sbjct: 217 ISLQILQFLRTFKAQIPVRDPGRQSVGGLYYLSYLDDNMLLGRAVGGGGVFVFTRAQSLY 276


>Glyma08g24010.1 
          Length = 182

 Score =  229 bits (583), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 113/152 (74%), Positives = 125/152 (82%), Gaps = 1/152 (0%)

Query: 75  RFSIEEALVNVEGCNKGD-PINLNKLDGTWRLQYTSASDVLVLFEAAARLPFFQVGQIFQ 133
           R  IEEALV+VE CN    PIN +KLDGTWRLQYTS+SDVLVL +AAA LPFFQVGQIFQ
Sbjct: 31  RSCIEEALVSVEACNMASHPINFSKLDGTWRLQYTSSSDVLVLLQAAATLPFFQVGQIFQ 90

Query: 134 KFECRDESNGGVIRNVVRWSVPNLLEEQDGATLLVSAKFTVVSVRNIYLQFQEITLQDIN 193
           KFEC D+S+GGVIRNVVRWS+PNLLEEQ+GATLLVSAKF VVSVRNIYLQFQEIT+QDI 
Sbjct: 91  KFECGDQSHGGVIRNVVRWSIPNLLEEQEGATLLVSAKFNVVSVRNIYLQFQEITVQDIY 150

Query: 194 INEXXXXXXXXXXXXRSYLSLQILQFLRAFKA 225
           I+E            RS++SLQILQFL  FKA
Sbjct: 151 ISEELRALIAPAILPRSFISLQILQFLHTFKA 182


>Glyma14g17350.1 
          Length = 114

 Score =  176 bits (447), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 87/114 (76%), Positives = 96/114 (84%), Gaps = 1/114 (0%)

Query: 47  DSELENKKLQLLTSIQDTQRGLLTTPDQRFSIEEALVNVEGCNKG-DPINLNKLDGTWRL 105
           D ELENKK  LLTSIQDTQRGLLTT +Q   IEEALV++EGCN G  PINL+ LDGTWRL
Sbjct: 1   DYELENKKHLLLTSIQDTQRGLLTTTNQCSCIEEALVSLEGCNIGCHPINLSNLDGTWRL 60

Query: 106 QYTSASDVLVLFEAAARLPFFQVGQIFQKFECRDESNGGVIRNVVRWSVPNLLE 159
           QYTS+SDVL+L +A A  PFFQVGQIFQKFEC  +SNGGVIR VVRWS+PNLLE
Sbjct: 61  QYTSSSDVLILLQAVATFPFFQVGQIFQKFECCHQSNGGVIRYVVRWSIPNLLE 114