Miyakogusa Predicted Gene
- Lj3g3v1970100.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1970100.3 tr|G7JQL8|G7JQL8_MEDTR Isochorismate synthase
OS=Medicago truncatula GN=MTR_4g076520 PE=4
SV=1,83.27,0,Chorismate_bind,Chorismate binding, C-terminal; seg,NULL;
ISOCHORISMATE SYNTHASE,Isochorismate synth,CUFF.43380.3
(586 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g25690.1 919 0.0
Glyma03g17420.1 858 0.0
Glyma18g03270.1 77 6e-14
Glyma10g35580.1 75 2e-13
Glyma15g43300.1 74 4e-13
Glyma20g23680.1 74 6e-13
Glyma18g03260.1 72 2e-12
Glyma20g31970.1 69 1e-11
>Glyma01g25690.1
Length = 563
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/552 (83%), Positives = 483/552 (87%), Gaps = 8/552 (1%)
Query: 42 ATTHKWLTHFSSTKHSNIKKXXXXXXXXXXPLYFIHHHRPVCQGCYLSMNGCGEGEYN-- 99
T HKWLTHF+ TK N +YF+ +HRPV Q C+LSMNGC EG++
Sbjct: 4 GTVHKWLTHFTDTKKCN-NILVPPASKEQQSIYFLQYHRPVYQRCHLSMNGCREGQHQYS 62
Query: 100 -ARNPVGTIETRTLAPVASLAMAMCSLKMAISELKADPPFCTSSGIVRVQVPIEEQVEAI 158
RNPVGTIET+TLAPVAS AMAM SL MAISEL+++ PF TSSGIVRVQVPIEEQVEAI
Sbjct: 63 RTRNPVGTIETKTLAPVASPAMAMYSLNMAISELESEAPFGTSSGIVRVQVPIEEQVEAI 122
Query: 159 DWLHSQSHLLLPRCFFSGREHNPRRGN----LVSVAGVGSAVFFSQPHPFSYWDWISIRR 214
DWL SQ+HLLLPRCFF GR+ N LVSVAGVGSAVFFSQPHPFSYWDWISIRR
Sbjct: 123 DWLLSQNHLLLPRCFFFGRKQYSPCCNGEEKLVSVAGVGSAVFFSQPHPFSYWDWISIRR 182
Query: 215 FLSERSPLIRAYGAIRFNAKAKMSSEWLAFGSFYFMIPQVEFNELEGGSMLTITIAWDNA 274
FLSER PLIRAYGAIRFNAKAK+SSEWLAFGSFYFMIPQVEFNELEGGSMLTITIAWDN
Sbjct: 183 FLSERCPLIRAYGAIRFNAKAKVSSEWLAFGSFYFMIPQVEFNELEGGSMLTITIAWDNN 242
Query: 275 LSWSWETAINELRATVCKVSSSIVKSPKQAPPTLILSSHNIPSKVDWDLAVNRALQMIEQ 334
LSWSWE AIN L+ T+ VSSSIVK PKQ PPTLI SSHNIPSKVDWDLAVN ALQMI++
Sbjct: 243 LSWSWENAINALQETLRNVSSSIVKFPKQTPPTLISSSHNIPSKVDWDLAVNGALQMIKR 302
Query: 335 EDSLLTKVVLARSTRVVPTADIDPLMWLACLKVEGGNAYQFFLQPPNAPAFIGNTPEQLF 394
DSLLTKVVLARSTRVVPTADIDPL WL+CLKVEG NAYQF LQPPNAPAFIGNTPEQLF
Sbjct: 303 NDSLLTKVVLARSTRVVPTADIDPLAWLSCLKVEGENAYQFLLQPPNAPAFIGNTPEQLF 362
Query: 395 HRKRLHITSEALAGTRARGVSLALDRQIELDLLTSPKDDIEFTIVRDTIRRKLEAVCENV 454
HRK LHITSEALAGTRARG S ALD QIELDLLTSPKDDIEFTIVRDTIRRKLEAVCE V
Sbjct: 363 HRKCLHITSEALAGTRARGASQALDCQIELDLLTSPKDDIEFTIVRDTIRRKLEAVCEKV 422
Query: 455 AIKPKKMIRKLPRIQHLFAQLVGKLRSEEDEFEILSSLHPSPAVCGFPTEEAQLLIAETE 514
IKP+KMIRKLPRIQHL++QL G+LRSEEDEFEILSSLHPSPAVCGFPTEEAQLLIAETE
Sbjct: 423 VIKPEKMIRKLPRIQHLYSQLSGRLRSEEDEFEILSSLHPSPAVCGFPTEEAQLLIAETE 482
Query: 515 VFDRGMYAGPVGWFGGGESEFAVGIRSALVEKDLGALIYAGTGIVEGSKPYLEWDELELK 574
VFDRGMYAGPVGWFGGGESEFAVGIRSALVEKDLGA IYAGTGIVEGS PYLEWDELELK
Sbjct: 483 VFDRGMYAGPVGWFGGGESEFAVGIRSALVEKDLGAFIYAGTGIVEGSSPYLEWDELELK 542
Query: 575 TSQFTKLLKLDL 586
TSQFTKLLKLDL
Sbjct: 543 TSQFTKLLKLDL 554
>Glyma03g17420.1
Length = 516
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/500 (86%), Positives = 447/500 (89%), Gaps = 10/500 (2%)
Query: 90 MNGCGEGEY-NAR---NPVGTIETRTLAPVASLAMAMCSLKMAISELKADPPFCTSSGIV 145
MNGC EG++ +AR NPVGTIETRTLA VAS AMAM SL MAISELK+D F TSSGIV
Sbjct: 1 MNGCREGQHQHARTRNNPVGTIETRTLAAVASPAMAMYSLNMAISELKSDALFGTSSGIV 60
Query: 146 RVQVPIEEQVEAIDWLHSQSHLLLPRCFFSGREHNPR------RGNLVSVAGVGSAVFFS 199
RVQVPIEEQVEAIDWLHSQ+HLLLPRCFF GR+ LVSVAGVGSAVFFS
Sbjct: 61 RVQVPIEEQVEAIDWLHSQNHLLLPRCFFFGRKQCSSPCCINGEEKLVSVAGVGSAVFFS 120
Query: 200 QPHPFSYWDWISIRRFLSERSPLIRAYGAIRFNAKAKMSSEWLAFGSFYFMIPQVEFNEL 259
QPHPFSYWDWISIRRFLSER PLIRAYGAIRFNAKAK+SSEWLAFGSFYFMIPQVEF EL
Sbjct: 121 QPHPFSYWDWISIRRFLSERCPLIRAYGAIRFNAKAKVSSEWLAFGSFYFMIPQVEFIEL 180
Query: 260 EGGSMLTITIAWDNALSWSWETAINELRATVCKVSSSIVKSPKQAPPTLILSSHNIPSKV 319
EGGSMLTITIAWDN LSWSWE AIN L+ T+CKVSSSIVK PKQ PPTLI SS NIPSKV
Sbjct: 181 EGGSMLTITIAWDNDLSWSWENAINALQETLCKVSSSIVKFPKQTPPTLISSSQNIPSKV 240
Query: 320 DWDLAVNRALQMIEQEDSLLTKVVLARSTRVVPTADIDPLMWLACLKVEGGNAYQFFLQP 379
DWDLAVNRALQMI Q DSLLTKVVLARSTRVVPT DIDPL WL+CLKVEG NAYQF LQP
Sbjct: 241 DWDLAVNRALQMIGQNDSLLTKVVLARSTRVVPTVDIDPLAWLSCLKVEGENAYQFLLQP 300
Query: 380 PNAPAFIGNTPEQLFHRKRLHITSEALAGTRARGVSLALDRQIELDLLTSPKDDIEFTIV 439
PNAPAFIGNTPEQLFHRK LHITSEALAGTRARG S ALD QIELDLLTSPKDDIEFTIV
Sbjct: 301 PNAPAFIGNTPEQLFHRKCLHITSEALAGTRARGASQALDLQIELDLLTSPKDDIEFTIV 360
Query: 440 RDTIRRKLEAVCENVAIKPKKMIRKLPRIQHLFAQLVGKLRSEEDEFEILSSLHPSPAVC 499
R+TIRRKLEAVCE V IKP+KMIRKL RIQHL++QL G+LRSEEDEFEILSSLHPSPAVC
Sbjct: 361 RETIRRKLEAVCEKVVIKPEKMIRKLSRIQHLYSQLSGRLRSEEDEFEILSSLHPSPAVC 420
Query: 500 GFPTEEAQLLIAETEVFDRGMYAGPVGWFGGGESEFAVGIRSALVEKDLGALIYAGTGIV 559
GFPTEEAQLLIA+ EVFDRGMYAGPVGWFGGGESEFAVGIRSALVEKDLGA IYAGTGIV
Sbjct: 421 GFPTEEAQLLIADAEVFDRGMYAGPVGWFGGGESEFAVGIRSALVEKDLGAFIYAGTGIV 480
Query: 560 EGSKPYLEWDELELKTSQFT 579
EGS PYLEWDELELKTSQFT
Sbjct: 481 EGSNPYLEWDELELKTSQFT 500
>Glyma18g03270.1
Length = 530
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 157/359 (43%), Gaps = 37/359 (10%)
Query: 256 FNELEGGSMLTITIAWD--NALSWSWETAINELRATVCKVSSSIVKSPKQAPPTLILSSH 313
F+ +E + + + + D ++ +++ + L V K+ + P+ AP ++ L +H
Sbjct: 171 FDHVEKKAYVILWVRVDRYSSAESAYKDGMERLEKLVAKLQDG--QPPRLAPGSVDLHTH 228
Query: 314 NIPSKVD--------WDLAVNRALQMIEQEDSLLTKVVLARSTRVVPTADIDPLMWLACL 365
+ + + AV +A + I+ D + ++VL S R DP L
Sbjct: 229 HFGPSLKKSSMTSEAYKEAVLQAKEHIKAGD--IFQIVL--SQRFERRTFADPFEIYRAL 284
Query: 366 KVEGGNAYQFFLQPPNAPAFIGNTPEQLFHRKRLHITSEALAGTRARGVSLALDRQIELD 425
+V + Y +LQ + ++PE L K+ I + LAGT RG + D + E
Sbjct: 285 RVVNPSPYMAYLQARGC-ILVASSPEILTRVKKNKIMNRPLAGTARRGKTPEEDARFEAI 343
Query: 426 LLTSPKDDIEFTIVRDTIRRKLEAVCENVAIKPKKM--IRKLPRIQHLFAQLVGKLRSEE 483
LL K E ++ D R + V ++ ++K +K+ + + + H+ + + G+L+
Sbjct: 344 LLRDEKQCAEHVMLVDLGRNDVGKVAKSGSVKVEKLMNVERYSHVMHISSTVTGELQEHL 403
Query: 484 DEFEILSSLHPSPAVCGFPTEEAQLLIAETEVFDRGMYAGPVGWFG-GGESEFAVGIRSA 542
++ L + P V G P +A LI E EV RG Y+G G+ GE + A+ +R+
Sbjct: 404 TSWDALRAALPVGTVSGAPKVKAMELIDELEVTRRGPYSGGFGYISFSGEMDIALALRTM 463
Query: 543 LVE-----------KDLG------ALIYAGTGIVEGSKPYLEWDELELKTSQFTKLLKL 584
+ KD+ A + AG GIV S P E E + K + + + L
Sbjct: 464 VFPSGTRYDTMYSYKDVDQRREWIAYLQAGAGIVADSVPDDEHQECQNKAAGLARAIDL 522
>Glyma10g35580.1
Length = 767
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 388 NTPEQLFHRKRLHI-TSEALAGTRARGVSLALDRQIELDLLTSPKDDIEFTIVRDTIRRK 446
++PE+ R +I ++ + GT ARG + D Q++ L S KD E ++ D +R
Sbjct: 566 SSPERFLQLDRKNILEAKPIKGTIARGATEEEDEQLKFKLQFSEKDQAENLMIVDLLRND 625
Query: 447 LEAVCENVAIK-PKKM-IRKLPRIQHLFAQLVGKLRSEEDEFEILSSLHPSPAVCGFPTE 504
L VC+ ++ P+ M + + + + + GK RS+ + + + P ++ G P
Sbjct: 626 LGRVCDPGSVHVPRLMDVESYATVHTMVSTIRGKKRSDVSAVDCVKAAFPGGSMTGAPKL 685
Query: 505 EAQLLIAETEVFDRGMYAGPVGWFGGGES-EFAVGIRSALVEKDLGALIYAGTGIVEGSK 563
+ L+ E RG+Y+G +G+F ++ + + IR+ +V + A I AG IV S
Sbjct: 686 RSMELLDSIESCSRGIYSGCIGFFSYNQAFDLNIVIRTVIVHEG-EASIGAGGAIVALSN 744
Query: 564 PYLEWDELELKTSQFTK 580
P E++E+ LKT T+
Sbjct: 745 PEDEYEEMVLKTKAPTR 761
>Glyma15g43300.1
Length = 758
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 12/169 (7%)
Query: 109 TRTLAPVASLAMAMCSLKMAISELKADPPFCTSSGIVRVQVPIEEQVEAIDWLHSQSHL- 167
TRTL+P +L + LK A+ L + P + +G +R QV + +A SQ H
Sbjct: 27 TRTLSPALTLEEGLEKLKEALQILNSPSP-SSPTGFLRFQVALPPSPKAFTLFCSQPHSS 85
Query: 168 -LLPRCFFSGREHNPRR---GNLVSVAGVGSAVFFSQPHPFSYWDWISIRRFLSERSPLI 223
+ P + S + + + V G+G+AV F P P + R++S S +
Sbjct: 86 SVFPLIYVSKNDADSKSLYVNGTRGVCGIGAAVSFLPPTPNHR---TFLNRYISSDSTNV 142
Query: 224 RAYGAIRFNAKAKMSSEWLAFGSFYFMIPQVEFNELEGGSMLTITIAWD 272
AYG + N +S + GSF+F IPQ+E +ELE S+L++T+AWD
Sbjct: 143 VAYGFMDVNLDDDVSHQE---GSFWFFIPQIELDELESVSILSMTLAWD 188
>Glyma20g23680.1
Length = 567
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 21/248 (8%)
Query: 357 DPLMWLACLKVEGGNAYQFFLQPPNAPAFIGNTPEQLFHRKRLHITSEALAGTRARGVSL 416
DP L++ + Y +LQ + ++PE L K+ IT+ LAGT RG +
Sbjct: 313 DPFEIYRALRIVNPSPYMTYLQA-RGSILVASSPEILTRVKKRKITNRPLAGTVRRGKTP 371
Query: 417 ALDRQIELDLLTSPKDDIEFTIVRDTIRRKLEAVCENVAIKPKKM--IRKLPRIQHLFAQ 474
D +E LL K E ++ D R + V + +++ +K+ I + + H+ +
Sbjct: 372 KEDIMLEKQLLNDEKQCAEHVMLVDLGRNDVGKVSKPGSVQVEKLMNIERYSHVMHISST 431
Query: 475 LVGKLRSEEDEFEILSSLHPSPAVCGFPTEEAQLLIAETEVFDRGMYAGPVGWFG-GGES 533
+ G+L ++ L + P V G P +A LI E EV RG Y+G G G+
Sbjct: 432 VTGELLDHLTSWDALRAALPVGTVSGAPKVKAMQLIDELEVARRGPYSGGFGGISFNGDM 491
Query: 534 EFAVGIRSALV-----------------EKDLGALIYAGTGIVEGSKPYLEWDELELKTS 576
+ A+ +R+ + ++ A + AG GIV S P E E E K +
Sbjct: 492 DIALALRTIVFPTNARYDTMYSYKDKNKRREWVAHLQAGAGIVADSDPADEQRECENKAA 551
Query: 577 QFTKLLKL 584
+ + L
Sbjct: 552 ALARAIDL 559
>Glyma18g03260.1
Length = 510
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 111/248 (44%), Gaps = 21/248 (8%)
Query: 357 DPLMWLACLKVEGGNAYQFFLQPPNAPAFIGNTPEQLFHRKRLHITSEALAGTRARGVSL 416
D + L+V + Y +LQ + ++PE L K+ I + LAGT RG +
Sbjct: 259 DIFQIVLTLRVVNPSPYMAYLQARGC-ILVASSPEILTRIKKNKIVNRPLAGTAKRGKTP 317
Query: 417 ALDRQIELDLLTSPKDDIEFTIVRDTIRRKLEAVCENVAIKPKKM--IRKLPRIQHLFAQ 474
D ++E LL K E ++ D R + V ++ ++K +K+ I + + H+ +
Sbjct: 318 EEDARLEAILLRDEKQCAEHVMLVDLGRNDVGKVAKSGSVKVEKLMNIERYSHVMHISST 377
Query: 475 LVGKLRSEEDEFEILSSLHPSPAVCGFPTEEAQLLIAETEVFDRGMYAGPVGWFGG-GES 533
+ G+L+ ++ L + P V G P +A LI E EV RG Y+G G+ GE
Sbjct: 378 VTGELQDHLTSWDALRAALPVGTVSGAPKVKAMELIDELEVKRRGPYSGGFGYISFLGEM 437
Query: 534 EFAVGIRSALVE-----------KDLG------ALIYAGTGIVEGSKPYLEWDELELKTS 576
+ A+ +R+ + KD+ A + AG GIV S P E E + K +
Sbjct: 438 DIALALRTMVFPTGTRYDTMYSYKDVDQRHEWIAYLQAGAGIVADSVPDDEHQECQNKAA 497
Query: 577 QFTKLLKL 584
+ + L
Sbjct: 498 GLARAIDL 505
>Glyma20g31970.1
Length = 830
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 5/191 (2%)
Query: 388 NTPEQLFHRKRLHITSEA-LAGTRARGVSLALDRQIELDLLTSPKDDIEFTIVRDTIRRK 446
++PE+ R +I + + GT ARG + + ++L L S KD E ++ D +R
Sbjct: 626 SSPERFLQLDRKNILEDKPIKGTIARGATKEENELLKLKLQFSEKDQAENLMIVDLLRND 685
Query: 447 LEAVCENVAIK-PKKM-IRKLPRIQHLFAQLVGKLRSEEDEFEILSSLHPSPAVCGFPTE 504
L VC+ ++ P+ M + + + + + GK RS+ + + P ++ G P
Sbjct: 686 LGRVCDPGSVHVPRLMDVESYATVHTMVSTIRGKKRSDVSAINCVKAAFPGGSMTGAPKL 745
Query: 505 EAQLLIAETEVFDRGMYAGPVGWFGGGES-EFAVGIRSALVEKDLGALIYAGTGIVEGSK 563
+ L+ E RG+Y+G +G+F + + + IR+ ++ + A I AG IV S
Sbjct: 746 RSMELLDSIESCSRGIYSGCIGFFSYNQRFDLNIVIRTVIIHEG-EASIGAGGAIVALSN 804
Query: 564 PYLEWDELELK 574
P E++E+ LK
Sbjct: 805 PEDEYEEMVLK 815