Miyakogusa Predicted Gene

Lj3g3v1957750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1957750.1 tr|G7K8G8|G7K8G8_MEDTR HEAT repeat-containing
protein OS=Medicago truncatula GN=MTR_5g092370 PE=4
SV,67.96,0,seg,NULL; U3snoRNP10,U3 small nucleolar RNA-associated
protein 10; SUBFAMILY NOT NAMED,NULL; BAP28,N,CUFF.43382.1
         (800 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g02780.1                                                       542   e-154
Glyma02g45960.1                                                       499   e-141

>Glyma14g02780.1 
          Length = 1804

 Score =  542 bits (1396), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 291/451 (64%), Positives = 326/451 (72%), Gaps = 69/451 (15%)

Query: 1   MIIGLLGNKAVLAPKLLNSLIRSVAEVAREEAKELMDLHWFRLSLIALINLIQSQNVEIL 60
           MIIGLLGNK  LAPKLLNSLIR VAEVAR+EA EL DLHWFRLSLI LI+L+QSQNVEIL
Sbjct: 257 MIIGLLGNKTALAPKLLNSLIRLVAEVARQEATELTDLHWFRLSLITLISLVQSQNVEIL 316

Query: 61  PMKALEILKDIRDLAGVLLELSKAFNIKKFLVVXXXXXXXXXXXXXXXQRALQSLIEKVP 120
           P+KALEILK+I                                     QR L SLIEKVP
Sbjct: 317 PLKALEILKEISS------------------------------SDEYCQRTLLSLIEKVP 346

Query: 121 LHDSVYHIVTKILSTCVKLSQKVGDSTSLTSAGWAKKILIIVNTKYPSELRGAVPHFLQD 180
           ++  VYH+VTKILSTCVKLSQKV DSTS  SA WAKKIL + NTKYPSELR A  HFLQD
Sbjct: 347 INGLVYHVVTKILSTCVKLSQKVSDSTSSMSARWAKKILFVFNTKYPSELRDATHHFLQD 406

Query: 181 NKTHSKKDDSLYKILCKMLDGNLDSSFDISESRVWFALYHPKADVRRATLLDINSSGILK 240
           NK  SKKDDSLYK+LCKMLDGN+DSS +IS+S +W  LYHPKADVR ATLLD+N+S ILK
Sbjct: 407 NKARSKKDDSLYKVLCKMLDGNMDSSLNISDSNIWLGLYHPKADVRCATLLDLNNSIILK 466

Query: 241 SKEVVSESLVDIQEAILRQLDDKDLTVVQAALNVDGLPNIIGSYKLLEALQNVLKRCIGK 300
           +K V SE+L++IQE ILRQLDDKDLTVVQAAL+VDGLPN+I S KLL+ALQNVLKRC  K
Sbjct: 467 TKAVASENLINIQEDILRQLDDKDLTVVQAALHVDGLPNVIDSSKLLDALQNVLKRCTDK 526

Query: 301 LLSGSADNVNLTADVAVTCLKNAISYFHDHTDSLKKAAAMIFPCLLVIPQTQGLNLKALA 360
           LLSGSADN +L  +VAVTCLKNAISYF DH D LK  AAMIFP LLV+PQTQ LNLKAL 
Sbjct: 527 LLSGSADNYSLNGEVAVTCLKNAISYFSDHADYLKNVAAMIFPLLLVLPQTQSLNLKALG 586

Query: 361 LVNKMNWPLYQNIAMSTSGE-----VAS-------------------------------- 383
           LVNK+NWPLYQNI +S+ G+     VA                                 
Sbjct: 587 LVNKINWPLYQNIVVSSFGKGKFNSVAQQGNTCSVGFLKRYFWFHHISKLLIMTLEVKLQ 646

Query: 384 --IPGSLSSINLKTINNMAENFMVHSEDHVA 412
             IPGSLSSINLKTI+NMA+NFMVH ++H+A
Sbjct: 647 TLIPGSLSSINLKTIDNMAKNFMVHPKEHIA 677



 Score =  147 bits (372), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/175 (50%), Positives = 109/175 (62%), Gaps = 13/175 (7%)

Query: 622 AIRVAAMNCIDELHALWCRIERSGKKNGNNATWFHFLGELL--WLLNEQKTLILSD---- 675
            IRVAAMNCID L  LWC +ERSGKKN  N    H + + +  +++     LILS     
Sbjct: 696 TIRVAAMNCIDSLRTLWCHVERSGKKNAEN---IHIVRQEISSFIVCICFELILSKHLRA 752

Query: 676 KKFL---PLLFASTLSSSCHNILVPQNIENRFDQPTKQRIIDFILGSALKFSNYGKLMIL 732
            K+L    LLF          I +       FDQPTK +I+ FILGS LKFSNYGKLMIL
Sbjct: 753 SKYLVEFKLLFCVIEIDCRDRIGLGIFCCYWFDQPTKIKILGFILGSTLKFSNYGKLMIL 812

Query: 733 TLLKEIGNAIFHA-KVEPLLSHFMKQYFDKRDKSCQKISNIETQIMCLLLEGCVF 786
           +L K IGNA+ H  +V PLLS  ++QY+D+  KSC K+SN ETQIMCLLLE C+ 
Sbjct: 813 SLFKGIGNALMHVPEVGPLLSSLLEQYYDELKKSCPKLSNTETQIMCLLLESCIM 867


>Glyma02g45960.1 
          Length = 1888

 Score =  499 bits (1284), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 277/430 (64%), Positives = 310/430 (72%), Gaps = 48/430 (11%)

Query: 1   MIIGLLGNKAVLAPKLLNSLIRSVAEVAREEAKELMDLHWFRLSLIALINLIQSQNVEIL 60
           MIIGLLGNK  LAPKLLNSLIR VAEVAR+EA EL DLHWFRLSLI LI+L+QSQNVEIL
Sbjct: 257 MIIGLLGNKTALAPKLLNSLIRLVAEVARQEATELTDLHWFRLSLITLISLVQSQNVEIL 316

Query: 61  PMKALEILKDIRDLAGVLLELSKAFNIKKFLVVXXXXXXXXXXXXXXXQRALQSLIEKVP 120
           PMKALEILK+I                                     QR L SLIEKVP
Sbjct: 317 PMKALEILKEISS------------------------------SDEYCQRTLLSLIEKVP 346

Query: 121 LHDSVYHIVTKILSTCVKLSQKVGDSTSLTSAGWAKKILIIVNTKYPSELRGAVPHFLQD 180
           ++  VYH+VTKILSTCVKLSQKV DSTS  SAGWAKKIL +VNTKYPSELRGA  HFLQD
Sbjct: 347 INGLVYHVVTKILSTCVKLSQKVSDSTSSVSAGWAKKILFVVNTKYPSELRGAAHHFLQD 406

Query: 181 NKTHSKKDDSLYKILCKMLDGNLDSSFDISESRVWFALYHPKADVRRATLL--------- 231
           NK  SKKDDSLYK+LCKMLDGN DSS DIS+S VW  LYHPK       L+         
Sbjct: 407 NKARSKKDDSLYKVLCKMLDGNSDSSLDISDSNVWLGLYHPKVSTIDLFLIIRLCVQGGR 466

Query: 232 DINSSGILKSKEVVSESLVDIQEAILRQLDDKDLTVVQAALNVDGLPNIIGSYKLLEALQ 291
            I  S    +   +S++L++IQE ILRQL+DKDLTVVQAAL VDGLPN+I S KLL+ALQ
Sbjct: 467 SIYPSKATSTSFELSQNLINIQEDILRQLEDKDLTVVQAALRVDGLPNVIDSSKLLDALQ 526

Query: 292 NVLKRCIGKLLSGSADNVNLTADVAVTCLKNAISYFHDHTDSLKKAAAMIFPCLLVIPQT 351
            VL+RC  KLLSGSADN +L  +VAVTCLKNAISYF DHTD LK  AAMIFP LLV+PQT
Sbjct: 527 KVLRRCTDKLLSGSADNYSLNGEVAVTCLKNAISYFSDHTDYLKNVAAMIFPLLLVLPQT 586

Query: 352 QGLNLKALALVNKMNWPLYQNIAMSTSGEVASIPGS---------LSSINLKTINNMAEN 402
           Q LNLKAL LVNK+NWPLYQNI +S+ GE  +   S         LSSINLKTI+NMA+N
Sbjct: 587 QSLNLKALGLVNKINWPLYQNIVVSSFGEGQNFENSNAHFLQILCLSSINLKTIDNMAKN 646

Query: 403 FMVHSEDHVA 412
           FMVH ++H+A
Sbjct: 647 FMVHPKEHIA 656



 Score =  197 bits (500), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 97/146 (66%), Positives = 115/146 (78%), Gaps = 7/146 (4%)

Query: 648 NGNNATWFHFLGELLWLLNEQKTLILSDKKFLPLLFASTLSSSC------HNILVPQNIE 701
           N NNATW HFLG++L L+++QKT ILSDKKFLP LFAS   SSC       NILVPQ+IE
Sbjct: 709 NCNNATWIHFLGDVLALMDQQKTFILSDKKFLPSLFASAFRSSCPNILEPRNILVPQDIE 768

Query: 702 NRFDQPTKQRIIDFILGSALKFSNYGKLMILTLLKEIGNAIFH-AKVEPLLSHFMKQYFD 760
            RFDQPTK +I+ FILGS LKFSNYGKLMIL+L K IGNA+ H  +V PLLS F++QY+D
Sbjct: 769 KRFDQPTKIKILGFILGSTLKFSNYGKLMILSLFKGIGNALMHIPEVGPLLSSFLEQYYD 828

Query: 761 KRDKSCQKISNIETQIMCLLLEGCVF 786
           + +KSC K+SN ETQI+CLLLE CV 
Sbjct: 829 ELNKSCPKLSNTETQIVCLLLESCVM 854



 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/39 (71%), Positives = 30/39 (76%), Gaps = 1/39 (2%)

Query: 485 AFFDHLSYANLRPLNAKVMVCIFWRLLAALISALPSDIL 523
           AFF+ L Y  LR LN KVM+CIFWR LA LIS LPSDIL
Sbjct: 658 AFFNELLYVKLRHLNVKVMICIFWR-LAQLISVLPSDIL 695