Miyakogusa Predicted Gene

Lj3g3v1953400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1953400.1 Non Chatacterized Hit- tr|G7IVD5|G7IVD5_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,91.49,3e-19,
,TC76463.path1.1
         (49 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g48100.1                                                        96   1e-20
Glyma04g12340.2                                                        93   5e-20
Glyma04g12340.1                                                        93   5e-20

>Glyma06g48100.1 
          Length = 278

 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 44/47 (93%), Positives = 47/47 (100%)

Query: 3   MRMRSAPQNIRRKWWRQVRIVLAIDAAVCIILFVIWLVICRGISCIR 49
           MRMRSAPQNIR+KWWRQVRIVLAIDAAVCI+LF+IWLVICRGISCIR
Sbjct: 232 MRMRSAPQNIRKKWWRQVRIVLAIDAAVCILLFIIWLVICRGISCIR 278


>Glyma04g12340.2 
          Length = 278

 Score = 93.2 bits (230), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 43/47 (91%), Positives = 46/47 (97%)

Query: 3   MRMRSAPQNIRRKWWRQVRIVLAIDAAVCIILFVIWLVICRGISCIR 49
           MRMRSAPQNIR+KWWRQVRIVLAIDAAVCI+LF+IWLVIC GISCIR
Sbjct: 232 MRMRSAPQNIRKKWWRQVRIVLAIDAAVCILLFIIWLVICHGISCIR 278


>Glyma04g12340.1 
          Length = 278

 Score = 93.2 bits (230), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 43/47 (91%), Positives = 46/47 (97%)

Query: 3   MRMRSAPQNIRRKWWRQVRIVLAIDAAVCIILFVIWLVICRGISCIR 49
           MRMRSAPQNIR+KWWRQVRIVLAIDAAVCI+LF+IWLVIC GISCIR
Sbjct: 232 MRMRSAPQNIRKKWWRQVRIVLAIDAAVCILLFIIWLVICHGISCIR 278