Miyakogusa Predicted Gene
- Lj3g3v1933150.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1933150.1 Non Chatacterized Hit- tr|A2YC35|A2YC35_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,54.32,9e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.43326.1
(171 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g48040.1 220 4e-58
Glyma04g12480.2 216 8e-57
Glyma04g12480.1 216 8e-57
Glyma06g48050.1 164 3e-41
Glyma12g12650.1 157 5e-39
Glyma06g45840.1 125 2e-29
Glyma04g12470.1 72 2e-13
Glyma13g37330.1 58 6e-09
>Glyma06g48040.1
Length = 165
Score = 220 bits (561), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 108/137 (78%), Positives = 115/137 (83%), Gaps = 1/137 (0%)
Query: 36 DAVFGSQA-HTGRNLLQAKKGCSVNFEFLNYTIITSKCKGPSYPPKDCCGAFKEFACPYV 94
D VF SQA HT RNLLQAKK CSVNFEFLNYT+ITSKCKGP YPPK+CCGAFKEFACPYV
Sbjct: 29 DTVFNSQAAHTARNLLQAKKSCSVNFEFLNYTVITSKCKGPHYPPKECCGAFKEFACPYV 88
Query: 95 DVLNDLTNDCASTMFSYINLYGKYPPGLFAHECREGKEGXXXXXXXXXXXXDDTSSQVVH 154
DVLNDLTN+CASTMFSYINLYGKYPPGLFA EC EGK G DDT++QVVH
Sbjct: 89 DVLNDLTNECASTMFSYINLYGKYPPGLFASECHEGKLGLACPALPPSASADDTANQVVH 148
Query: 155 FPSLVLVLTACFLILLF 171
PSL+L+LTACFLILLF
Sbjct: 149 CPSLLLMLTACFLILLF 165
>Glyma04g12480.2
Length = 170
Score = 216 bits (551), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 108/138 (78%), Positives = 115/138 (83%), Gaps = 2/138 (1%)
Query: 36 DAVFGSQ-AHTGRNLLQAKKGCSVNFEFLNYTIITSKCKGPSYPPKDCCGAFKEFACPYV 94
D VF SQ AHTGRNLLQAKKGCSVNFEFLNYT+ITSKCKGP YPPK+CCGAFKEFACPY
Sbjct: 33 DTVFDSQPAHTGRNLLQAKKGCSVNFEFLNYTVITSKCKGPRYPPKECCGAFKEFACPYA 92
Query: 95 DVLNDLTNDCASTMFSYINLYGKYPPGLFAHECREGKEGXX-XXXXXXXXXXDDTSSQVV 153
DVLNDLTN+CASTMFSYINLYGKYPPGLFA ECREGK G DDT++Q V
Sbjct: 93 DVLNDLTNECASTMFSYINLYGKYPPGLFASECREGKFGLACPAVPPSAVSADDTANQAV 152
Query: 154 HFPSLVLVLTACFLILLF 171
H PSL+L+L ACFLILLF
Sbjct: 153 HCPSLLLMLIACFLILLF 170
>Glyma04g12480.1
Length = 170
Score = 216 bits (551), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 108/138 (78%), Positives = 115/138 (83%), Gaps = 2/138 (1%)
Query: 36 DAVFGSQ-AHTGRNLLQAKKGCSVNFEFLNYTIITSKCKGPSYPPKDCCGAFKEFACPYV 94
D VF SQ AHTGRNLLQAKKGCSVNFEFLNYT+ITSKCKGP YPPK+CCGAFKEFACPY
Sbjct: 33 DTVFDSQPAHTGRNLLQAKKGCSVNFEFLNYTVITSKCKGPRYPPKECCGAFKEFACPYA 92
Query: 95 DVLNDLTNDCASTMFSYINLYGKYPPGLFAHECREGKEGXX-XXXXXXXXXXDDTSSQVV 153
DVLNDLTN+CASTMFSYINLYGKYPPGLFA ECREGK G DDT++Q V
Sbjct: 93 DVLNDLTNECASTMFSYINLYGKYPPGLFASECREGKFGLACPAVPPSAVSADDTANQAV 152
Query: 154 HFPSLVLVLTACFLILLF 171
H PSL+L+L ACFLILLF
Sbjct: 153 HCPSLLLMLIACFLILLF 170
>Glyma06g48050.1
Length = 163
Score = 164 bits (416), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 83/99 (83%), Gaps = 1/99 (1%)
Query: 36 DAVFGSQA-HTGRNLLQAKKGCSVNFEFLNYTIITSKCKGPSYPPKDCCGAFKEFACPYV 94
D+VF SQA H GRNLLQAKK C VNFEFLNYT+ITSKCKGP YPPK CC AFKEFACPY
Sbjct: 36 DSVFDSQAAHAGRNLLQAKKSCPVNFEFLNYTVITSKCKGPQYPPKQCCAAFKEFACPYA 95
Query: 95 DVLNDLTNDCASTMFSYINLYGKYPPGLFAHECREGKEG 133
+ LND TNDCA+ MFSYINLYGKYP G FA CR+GK+G
Sbjct: 96 NALNDSTNDCAAIMFSYINLYGKYPFGFFASVCRQGKKG 134
>Glyma12g12650.1
Length = 174
Score = 157 bits (397), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 96/140 (68%), Gaps = 6/140 (4%)
Query: 36 DAVFGSQAHTGRNLLQAKKGCSVNFEFLNYTIITSKCKGPSYPPKDCCGAFKEFACPYVD 95
D +FG++A TGR LLQAKK C V+FE NYT++TS+CKGP YPPK CC AFK+FACP+ +
Sbjct: 34 DDIFGAEASTGRALLQAKKACGVDFENQNYTVLTSQCKGPQYPPKVCCEAFKQFACPFAN 93
Query: 96 VLNDLTNDCASTMFSYINLYGKYPPGLFAHECREGKEGXXXXXXXXXXXXDDTSSQVVHF 155
+ND+T DC+S MFSYIN+YGKYPPGLFA+EC+EG +G TSS +H
Sbjct: 94 EINDMTTDCSSVMFSYINIYGKYPPGLFANECKEGNQGLDCSQVKPANT--STSSNTIHV 151
Query: 156 PS----LVLVLTACFLILLF 171
+ L+ A FL LF
Sbjct: 152 AAPPHFFSLMTIAAFLGFLF 171
>Glyma06g45840.1
Length = 119
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 79/120 (65%), Gaps = 8/120 (6%)
Query: 56 CSVNFEFLNYTIITSKCKGPSYPPKDCCGAFKEFACPYVDVLNDLTNDCASTMFSYINLY 115
C V FE NYT++TS+CKGP YPPK CC AFK+FACP+ + +ND+T DCA+ MFSYIN+Y
Sbjct: 1 CGVEFENKNYTVLTSQCKGPQYPPKVCCEAFKQFACPFSNEVNDMTTDCATVMFSYINIY 60
Query: 116 GKYPPGLFAHECREGKEGXXXXXXXXXXXXDDTSSQVVHFPS----LVLVLTACFLILLF 171
GKYPPGLFA++C+EG +G +TSS +H + L + FL LF
Sbjct: 61 GKYPPGLFANQCKEGNQGLDCSQVTPT----NTSSNTIHVAAPPHFFSLATISAFLGFLF 116
>Glyma04g12470.1
Length = 81
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Query: 39 FGSQA-HTGRNLLQAKKGCSVNFEFLNYTIITSKCKGPSYPPKD 81
F SQA HTGRNLLQAKK C VNFEFLNYTIIT KCKG YPP +
Sbjct: 34 FNSQAEHTGRNLLQAKKSCPVNFEFLNYTIITCKCKGAQYPPSN 77
>Glyma13g37330.1
Length = 132
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 79 PKDCCGAFKEFACPYVDVLNDLTNDCASTMFSYINLYGKYPPGLFAHECREGKEG 133
P+ CC AFK+F CP + +ND+T DCAS MFS +N+YG PP AH C + G
Sbjct: 27 PRFCCEAFKQFGCPCANEINDMTIDCASLMFSNVNIYGT-PP--LAHICSSVERG 78