Miyakogusa Predicted Gene

Lj3g3v1933120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1933120.1 CUFF.43372.1
         (162 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g48030.1                                                       232   1e-61
Glyma04g12510.1                                                       230   6e-61

>Glyma06g48030.1 
          Length = 164

 Score =  232 bits (592), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 118/147 (80%), Positives = 128/147 (87%), Gaps = 4/147 (2%)

Query: 17  TIQKSQTHLLKPSNVTFQGLRPLTRSKVSTLSTPNKRVSRGFV-VKAELNTSLVISLSTG 75
           +IQK   H LKPSNV FQGLRPLTR      ST  + + +G V V+AELN++LVISLSTG
Sbjct: 21  SIQKH--HHLKPSNVCFQGLRPLTRFTTKVSSTTKRVIPKGGVGVRAELNSALVISLSTG 78

Query: 76  LSLFLGRFVFFNFQRENVAKQGLPEQNGLTHFEAGDTRAKEYVSLLKSNDPVGFNIVDVL 135
           LSLFLGRFVFFNFQRENVAKQ +PEQNGLTHFEAGDTRAKEYVSLLKSNDPVGFNIVDVL
Sbjct: 79  LSLFLGRFVFFNFQRENVAKQ-VPEQNGLTHFEAGDTRAKEYVSLLKSNDPVGFNIVDVL 137

Query: 136 AWGSIGHIVAYYILATASNGYDPSFFG 162
           AWGSIGH+VAYYILAT SNGYDP+FFG
Sbjct: 138 AWGSIGHVVAYYILATTSNGYDPAFFG 164


>Glyma04g12510.1 
          Length = 163

 Score =  230 bits (586), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 119/149 (79%), Positives = 129/149 (86%), Gaps = 6/149 (4%)

Query: 17  TIQKSQTHLLKPSNVTFQGLRPL---TRSKVSTLSTPNKRVSRGFVVKAELNTSLVISLS 73
           TIQK   H LKPSNV FQGLRPL   T++  + +ST  KRV     V+AELN++LVISLS
Sbjct: 18  TIQKH--HHLKPSNVCFQGLRPLARFTKASSTKVSTTTKRVIPKGGVRAELNSALVISLS 75

Query: 74  TGLSLFLGRFVFFNFQRENVAKQGLPEQNGLTHFEAGDTRAKEYVSLLKSNDPVGFNIVD 133
           TGLSLFLGRFVFFNFQRENVAKQ +PEQNGLTHFEAGDTRAKEYVSLLKSNDPVGFNIVD
Sbjct: 76  TGLSLFLGRFVFFNFQRENVAKQ-VPEQNGLTHFEAGDTRAKEYVSLLKSNDPVGFNIVD 134

Query: 134 VLAWGSIGHIVAYYILATASNGYDPSFFG 162
           VLAWGSIGH+VAYYILAT SNGYDP+FFG
Sbjct: 135 VLAWGSIGHVVAYYILATTSNGYDPAFFG 163