Miyakogusa Predicted Gene

Lj3g3v1906600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1906600.1 Non Chatacterized Hit- tr|I0Z603|I0Z603_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,40.57,3e-18,NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNIT,NULL;
Complex1_LYR_2,NULL,CUFF.43285.1
         (133 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g37200.1                                                       196   6e-51
Glyma13g26270.1                                                       195   1e-50
Glyma09g11970.1                                                       112   1e-25

>Glyma15g37200.1 
          Length = 131

 Score =  196 bits (498), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 91/129 (70%), Positives = 109/129 (84%), Gaps = 3/129 (2%)

Query: 5   LRSVRVPPNSVSLEEARHRVFDFFRIACRSLPSVMETYNLYDVASVSQLRSTVASEIRKN 64
           LR+V+V PNS ++EEARHRVF FFR ACRSLPSVME YNLYDV SVS+LRS+V+S+IRKN
Sbjct: 6   LRNVKVLPNSANMEEARHRVFQFFRTACRSLPSVMEIYNLYDVVSVSELRSSVSSQIRKN 65

Query: 65  THVTDPKVIDMLLFKATEELKDIVDHAKQRHHVVGQYVVGRHKLEQQELGSKGQTISPFL 124
            HVTDPKVIDMLLFK  EELK++VDH+KQRHH++GQYVVG+   + Q+  +K Q  S FL
Sbjct: 66  IHVTDPKVIDMLLFKGMEELKNVVDHSKQRHHIIGQYVVGQ---QVQDSATKDQGTSTFL 122

Query: 125 QNFYKTNYF 133
           +NFY TNYF
Sbjct: 123 KNFYNTNYF 131


>Glyma13g26270.1 
          Length = 131

 Score =  195 bits (495), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 91/129 (70%), Positives = 108/129 (83%), Gaps = 3/129 (2%)

Query: 5   LRSVRVPPNSVSLEEARHRVFDFFRIACRSLPSVMETYNLYDVASVSQLRSTVASEIRKN 64
           LR+V+V PNS ++EEARHRVF+FFR ACRSLPSVME YNLYDV SVS+LRS+VAS+IR N
Sbjct: 6   LRNVKVLPNSANMEEARHRVFEFFRTACRSLPSVMEIYNLYDVVSVSELRSSVASQIRNN 65

Query: 65  THVTDPKVIDMLLFKATEELKDIVDHAKQRHHVVGQYVVGRHKLEQQELGSKGQTISPFL 124
            HVTDPKVIDMLLFK  EELK++VDH+KQRHH++GQYVVGR   + Q+  +K    S FL
Sbjct: 66  IHVTDPKVIDMLLFKGMEELKNVVDHSKQRHHIIGQYVVGR---QVQDSATKDPDTSTFL 122

Query: 125 QNFYKTNYF 133
           +NFY TNYF
Sbjct: 123 KNFYNTNYF 131


>Glyma09g11970.1 
          Length = 150

 Score =  112 bits (280), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/74 (72%), Positives = 63/74 (85%), Gaps = 1/74 (1%)

Query: 1  MSNL-LRSVRVPPNSVSLEEARHRVFDFFRIACRSLPSVMETYNLYDVASVSQLRSTVAS 59
          M+N  LR+V+V PNS ++EEARHRVF+FFR ACR LPSVME YNLYDV SVS+LRS+VAS
Sbjct: 1  MANAALRNVKVLPNSANMEEARHRVFEFFRTACRLLPSVMEIYNLYDVVSVSELRSSVAS 60

Query: 60 EIRKNTHVTDPKVI 73
          +IR N HVTDPKV 
Sbjct: 61 QIRNNIHVTDPKVF 74