Miyakogusa Predicted Gene

Lj3g3v1834170.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1834170.1 Non Chatacterized Hit- tr|I1MRH7|I1MRH7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32830 PE,60.94,2e-16,
,CUFF.43183.1
         (80 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g02880.1                                                        90   5e-19
Glyma07g37750.1                                                        79   8e-16

>Glyma17g02880.1 
          Length = 435

 Score = 90.1 bits (222), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/64 (60%), Positives = 47/64 (73%)

Query: 9   AGFSATPNIRSTIRTECHNGTGNTAYRYDKLCDVVDGSNGVCEHGPKRFIRPMSQASFCL 68
            G SATPNIR +IR+EC N T ++   YD LC++VD SNG+CEH P RF+RPM  ASFCL
Sbjct: 246 GGVSATPNIRRSIRSECENATTSSDSSYDTLCEIVDCSNGICEHDPIRFMRPMLSASFCL 305

Query: 69  QTRG 72
           Q  G
Sbjct: 306 QPPG 309


>Glyma07g37750.1 
          Length = 223

 Score = 79.3 bits (194), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 34/60 (56%), Positives = 43/60 (71%)

Query: 13  ATPNIRSTIRTECHNGTGNTAYRYDKLCDVVDGSNGVCEHGPKRFIRPMSQASFCLQTRG 72
           + P +R +IR+EC N T ++   YD LC++VD SNGVCEH P RF+RPM  ASFCLQ  G
Sbjct: 51  SQPRVRRSIRSECENATSSSDSSYDTLCEIVDCSNGVCEHDPVRFMRPMLSASFCLQPPG 110