Miyakogusa Predicted Gene

Lj3g3v1820590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1820590.1 Non Chatacterized Hit- tr|F6HP94|F6HP94_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,53.06,3e-19,Exostosin,Exostosin-like,CUFF.43167.1
         (100 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g02880.1                                                       120   4e-28
Glyma07g37750.1                                                       108   1e-24

>Glyma17g02880.1 
          Length = 435

 Score =  120 bits (301), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/93 (61%), Positives = 69/93 (74%), Gaps = 1/93 (1%)

Query: 9   AGFSATPNIRSTIRTECHNGTGNTAYRYDKLCDVVDGSNGVCEHGPKRFMRPMSQASFCL 68
            G SATPNIR +IR+EC N T ++   YD LC++VD SNG+CEH P RFMRPM  ASFCL
Sbjct: 246 GGVSATPNIRRSIRSECENATTSSDSSYDTLCEIVDCSNGICEHDPIRFMRPMLSASFCL 305

Query: 69  QTRG-TSTRGSTYEAILVVCMLVFFKGLSAKSQ 100
           Q  G T TR ST++AIL  C+ VFF+ LSAK+Q
Sbjct: 306 QPPGDTPTRRSTFDAILAGCIPVFFEELSAKAQ 338


>Glyma07g37750.1 
          Length = 223

 Score =  108 bits (271), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 51/89 (57%), Positives = 66/89 (74%), Gaps = 1/89 (1%)

Query: 13  ATPNIRSTIRTECHNGTGNTAYRYDKLCDVVDGSNGVCEHGPKRFMRPMSQASFCLQTRG 72
           + P +R +IR+EC N T ++   YD LC++VD SNGVCEH P RFMRPM  ASFCLQ  G
Sbjct: 51  SQPRVRRSIRSECENATSSSDSSYDTLCEIVDCSNGVCEHDPVRFMRPMLSASFCLQPPG 110

Query: 73  -TSTRGSTYEAILVVCMLVFFKGLSAKSQ 100
            T+TR ST++A+L  C+ VFF+ LSAK+Q
Sbjct: 111 DTTTRRSTFDAVLAGCIPVFFEELSAKAQ 139