Miyakogusa Predicted Gene

Lj3g3v1770760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1770760.1 CUFF.43073.1
         (114 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g38600.1                                                        57   5e-09
Glyma01g43990.1                                                        50   5e-07

>Glyma20g38600.1 
          Length = 801

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 40/55 (72%), Gaps = 4/55 (7%)

Query: 45  GSLSIDAIAKAKQVLQIR----EKLKNIPHLNKTSTPYSQGITPLGSKNKSSAPS 95
           GS SIDA+AKAK+ LQ++    EKLK IP LNK+ST   QG + LGSK +S+ PS
Sbjct: 209 GSFSIDALAKAKKALQMQKELSEKLKKIPQLNKSSTQTLQGSSNLGSKTESTMPS 263


>Glyma01g43990.1 
          Length = 832

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/55 (60%), Positives = 42/55 (76%), Gaps = 4/55 (7%)

Query: 45  GSLSIDAIAKAKQVLQIR----EKLKNIPHLNKTSTPYSQGITPLGSKNKSSAPS 95
           GSLSIDA+AKAK+ LQ++    EKLK IP LNK+S+  SQG + LGS N+S+ PS
Sbjct: 237 GSLSIDALAKAKKALQMQKELSEKLKKIPQLNKSSSQNSQGSSNLGSMNESAVPS 291