Miyakogusa Predicted Gene

Lj3g3v1631800.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1631800.1 tr|I0Z597|I0Z597_9CHLO Mitochondrial import inner
membrane translocase subunit Tim9 OS=Coccomyxa
sub,44.94,3e-17,MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE
SUBUNIT TIM9,NULL; zf-Tim10_DDP,Mitochondrial inner
,NODE_75838_length_678_cov_10.312684.path2.1
         (96 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g19460.1                                                       163   3e-41
Glyma11g14830.1                                                       141   2e-34
Glyma12g06770.1                                                       141   2e-34

>Glyma03g19460.1 
          Length = 94

 Score =  163 bits (413), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 75/93 (80%), Positives = 84/93 (90%)

Query: 1  MDKKVIADLDNLPEEDKQRMSTMVDQLQTRDSLRMYNSIVERCFKNCVNTFYRKSLTKHE 60
          MDK +I+DLDN PEEDKQRMSTM DQLQ RDSLRMYNS+VE+CFK CVNTFYRKS+TK E
Sbjct: 1  MDKNIISDLDNFPEEDKQRMSTMADQLQIRDSLRMYNSLVEKCFKECVNTFYRKSMTKQE 60

Query: 61 ETCVLRCAEKFVRLSTQVGLRFSDLNLGASTKD 93
          ETCVLRCA+K++RLS QVGLRFSDLN G+ST D
Sbjct: 61 ETCVLRCAQKYLRLSMQVGLRFSDLNQGSSTTD 93


>Glyma11g14830.1 
          Length = 93

 Score =  141 bits (355), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 64/93 (68%), Positives = 80/93 (86%)

Query: 1  MDKKVIADLDNLPEEDKQRMSTMVDQLQTRDSLRMYNSIVERCFKNCVNTFYRKSLTKHE 60
          MDK ++ADLD+LPE DKQRM+ M+DQLQ RDSLRMYNS+VERCF +CV+TF  KSL K E
Sbjct: 1  MDKSMLADLDSLPEADKQRMTVMIDQLQIRDSLRMYNSLVERCFSDCVDTFKHKSLQKQE 60

Query: 61 ETCVLRCAEKFVRLSTQVGLRFSDLNLGASTKD 93
          ETCV RCAEKF++ S +VG+RF++LN GA+T+D
Sbjct: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATQD 93


>Glyma12g06770.1 
          Length = 93

 Score =  141 bits (355), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 64/93 (68%), Positives = 80/93 (86%)

Query: 1  MDKKVIADLDNLPEEDKQRMSTMVDQLQTRDSLRMYNSIVERCFKNCVNTFYRKSLTKHE 60
          MDK ++ADLD+LPE DKQRM+ M+DQLQ RDSLRMYNS+VERCF +CV+TF  KSL K E
Sbjct: 1  MDKSMLADLDSLPEADKQRMTVMIDQLQIRDSLRMYNSLVERCFNDCVDTFKHKSLQKQE 60

Query: 61 ETCVLRCAEKFVRLSTQVGLRFSDLNLGASTKD 93
          ETCV RCAEKF++ S +VG+RF++LN GA+T+D
Sbjct: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATQD 93