Miyakogusa Predicted Gene

Lj3g3v1606140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1606140.1 Non Chatacterized Hit- tr|K4CA30|K4CA30_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,34.54,1e-16,DUF740,Uncharacterised protein family UPF0503;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,,CUFF.42865.1
         (577 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g27360.1                                                       185   1e-46
Glyma03g14640.1                                                       142   7e-34
Glyma07g17490.1                                                       107   3e-23
Glyma18g42400.1                                                       104   2e-22
Glyma07g17510.1                                                        68   3e-11
Glyma07g17570.1                                                        64   5e-10
Glyma02g14100.1                                                        61   3e-09
Glyma18g07190.1                                                        54   4e-07
Glyma11g23390.1                                                        52   2e-06

>Glyma01g27360.1 
          Length = 581

 Score =  185 bits (469), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 160/431 (37%), Positives = 188/431 (43%), Gaps = 96/431 (22%)

Query: 189 LKTMKDHIDLDSSQTKKPK---------GSFWSAASVFSKKLXXXXXXXXXXXXXXXEGA 239
           LKTMKDHIDL+SSQ  K +         GSF+SAASVFSKKL                GA
Sbjct: 205 LKTMKDHIDLNSSQNNKQQKARDFKELAGSFFSAASVFSKKLQKWRQKQKAKKRRSG-GA 263

Query: 240 LPAGKPTGRHFRESRRSRTTGSDGGPATLTRDSHWTPLGRGS----RLTLGGCRPMIRG- 294
           LP  KP GR FR+++        G  +  T        GR S    R++    R  I   
Sbjct: 264 LPVEKPIGRQFRDTQSEIADYGFGRRSCDTDPRFSLDAGRFSLDAGRMSFDDPRYSIEEP 323

Query: 295 -----------TPLTSRXTMLSVVEDAP-PPPV---NVLRTDAQIPVEEPPVEDDAVPGG 339
                      +      TMLSVVEDAP P PV   +V+RTD QIPVEE   ED++VPGG
Sbjct: 324 RASWDGYLVGRSAFPRMPTMLSVVEDAPVPVPVAVNHVVRTDMQIPVEEGSNEDESVPGG 383

Query: 340 SAQTREYYXXXXXXXXXXXXXXXXXXXXEIGGDELIRSVSNGSIIXXXXXXXXXXXXXXD 399
           SAQTREYY                     +  DE                          
Sbjct: 384 SAQTREYYDSGSRRRKSLDRSSSARKSISLEVDE-------------------------- 417

Query: 400 FIHGAKMGFQDRG-------DDCCSE------VYGNGERKEEKKSRRWSIWGLIHRRGRN 446
                 MGF DR        +DCCS+      V GNG+  ++ +  RWSIWG IHRRG N
Sbjct: 418 ------MGFNDREFGSNSMREDCCSDKMFDVGVIGNGKGGKKGRRWRWSIWGFIHRRGGN 471

Query: 447 KDEDDGKCSRVNGVERCFSEDHXXXXXXXXXXXXXXXXXXXXXTQAFTGSLGTQSQRRNI 506
           KD D+ + SRVNGVER +SE                            G  G        
Sbjct: 472 KDGDEDRYSRVNGVERSYSESWGGGGSGFNGRMLRSNSSVSWRNSNGNGKKGK------- 524

Query: 507 XXXXXXXXXXXXXDEFVLERNRSARYSPSSVDNGLLRFYLAPMXXXXXXXXXXXXXXXQA 566
                        DE VLERNRSARYSP+++DNGLLRFYL PM               QA
Sbjct: 525 -------------DELVLERNRSARYSPNNIDNGLLRFYLTPM-RGSRRSGSVKSRSNQA 570

Query: 567 QSIARSVIGLY 577
            SIARSV+GLY
Sbjct: 571 HSIARSVLGLY 581



 Score = 94.0 bits (232), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/102 (53%), Positives = 61/102 (59%), Gaps = 4/102 (3%)

Query: 13  HRPSTSCHRHPDGQFTGFCPSCLCERLTVLHPTTPSSSSIVPARKXXXXXXXXXLXXXXX 72
           HRPSTSC RHPD  FTGFCPSCLCERL +L P    S++   +                 
Sbjct: 8   HRPSTSCPRHPDEAFTGFCPSCLCERLALLDPNNNPSTAN--SSSSSSWKPASTAAALKA 65

Query: 73  XXXXXXXPELRRSKSFSASKANEALSGAFEPQRKSCDVRVRG 114
                  PELRR+KSFSASK NE  S +FEPQRKSCDVRVR 
Sbjct: 66  LFRPPSLPELRRTKSFSASK-NEPFS-SFEPQRKSCDVRVRN 105


>Glyma03g14640.1 
          Length = 272

 Score =  142 bits (359), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/279 (37%), Positives = 121/279 (43%), Gaps = 32/279 (11%)

Query: 323 QIPVEEPPVEDDAVPGGSAQTREYYXXXXXXXXXXXXXXXXXXXXEIGGDELIRSVSNGS 382
           QIPVEE   ED++VPGGSAQTR+YY                     +  DEL  + +   
Sbjct: 2   QIPVEEGLNEDESVPGGSAQTRDYYDSGSRRRKSLDRSSSARKSISLEVDELGNNGNENG 61

Query: 383 IIXXXXXXXXXXXXXXDFIHGAKMGFQDRGDD--------CCSE------VYGNGERKEE 428
                           D+  G +MGF DR  D        CCSE      V G    KE 
Sbjct: 62  ---NGNGNAKVAPAGVDYAQGVRMGFNDREFDRSNSLREHCCSEKMFDVGVIG----KEG 114

Query: 429 KKSRRW--SIWGLIHRRGRNKDEDDGKCSRVNGVERCFSEDHXXXXXXXXXXX------- 479
           KK RRW  SIWG IHRRG NKDED+ + SRVNGVER +SE                    
Sbjct: 115 KKGRRWRWSIWGFIHRRGGNKDEDEDRYSRVNGVERSYSESWGGDGRGGGGGGGGFNGRI 174

Query: 480 -XXXXXXXXXXTQAFTGSLGTQSQRRNIXXXXXXXXXXXXXDEFVLERNRSARYSPSSVD 538
                       Q      G                     DEFVLER+RSARYSP+++D
Sbjct: 175 LRSNSSVSWRNAQGVGNCGGGGFGGFRRNGVQSNGNGKKGKDEFVLERSRSARYSPNNID 234

Query: 539 NGLLRFYLAPMXXXXXXXXXXXXXXXQAQSIARSVIGLY 577
           NGLLRFYL PM               QA SIARSV+GLY
Sbjct: 235 NGLLRFYLTPM-RGSRRNGSVKSRSNQAHSIARSVLGLY 272


>Glyma07g17490.1 
          Length = 651

 Score =  107 bits (268), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/146 (47%), Positives = 77/146 (52%), Gaps = 16/146 (10%)

Query: 13  HRPSTSCHRHPDGQFTGFCPSCLCERLTVLHPTTPSSSSIVPARKXXXXXXXXX------ 66
           HRPSTSC RHP   FTGFCPSCLCERL VL P + S+SS   ARK               
Sbjct: 24  HRPSTSCDRHPQENFTGFCPSCLCERLAVLDPNSSSTSSA--ARKPPTSSTAAAALKAIF 81

Query: 67  ---LXXXXXXXXXXXXPELRRSKSFSASKANEALSGAFEPQRKSCDVRVRGAXXXXXXXX 123
              +            PELRR+KSFSASK NEALSG FEPQRKSCDVR R          
Sbjct: 82  RPSIAARNRPPPSSFLPELRRTKSFSASK-NEALSGFFEPQRKSCDVRGRSTLFSLFNQE 140

Query: 124 XXXXEKKIEAVDCRNQASSSSNIQVP 149
                +    V+ R+   SSS +Q P
Sbjct: 141 AAVAVE----VETRHNLPSSSVVQKP 162



 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 93/192 (48%), Gaps = 37/192 (19%)

Query: 189 LKTMKDHIDLDSSQTKKP------KGSFWSAASVFSKKLXXXXXXXXXXXXXX------X 236
           LK  KDH+DLDSSQTKKP      KGSFWSAASVFSKKL                     
Sbjct: 240 LKETKDHMDLDSSQTKKPSGGRDLKGSFWSAASVFSKKLQKWRQKQKNKKRERNGVVVGS 299

Query: 237 EGALPAGKPTGRHFRESRRSRTTGSDGGPATLTRDSHWTPLGRGSRLTLGGCRPMIRGT- 295
              LP  KP  R FRE   +++  +D G    + D+        +R++     P      
Sbjct: 300 GTLLPVEKPISRQFRE---TQSEIADYGFGRRSCDTDPRFSLDAARMSFDFEEPRASWDG 356

Query: 296 PLTSRXT---------MLSVVEDAPPPPVNVLRTDAQIPVEEPPVED-----------DA 335
            L +R T         M +++EDA P PV VLRTD+ IPVEEP  ED             
Sbjct: 357 YLMARTTSSFAAVPPRMPTMIEDA-PAPVQVLRTDSLIPVEEPEYEDALILNLNLNPNPN 415

Query: 336 VPGGSAQTREYY 347
           +PGGSAQT+EYY
Sbjct: 416 LPGGSAQTKEYY 427


>Glyma18g42400.1 
          Length = 188

 Score =  104 bits (260), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 63/111 (56%), Gaps = 10/111 (9%)

Query: 13  HRPSTSCHRHPDGQFTGFCPSCLCERLTVLHPTT---------PSSSSIVPARKXXXXXX 63
           HRPSTSC RHP   FTGFCPSCLCERL VL P +         P +SS   A        
Sbjct: 18  HRPSTSCDRHPQENFTGFCPSCLCERLAVLDPNSNSSSSAARKPPTSSTAAAALKAIFRP 77

Query: 64  XXXLXXXXXXXXXXXXPELRRSKSFSASKANEALSGAFEPQRKSCDVRVRG 114
                           PELRR+KSFSASK NEALSG FEPQRKSCDVR R 
Sbjct: 78  SAAARNRPPPSSSSFLPELRRTKSFSASK-NEALSGFFEPQRKSCDVRARS 127


>Glyma07g17510.1 
          Length = 211

 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/105 (41%), Positives = 51/105 (48%), Gaps = 8/105 (7%)

Query: 13  HRPSTSCHRHPDGQFTGFCPSCLCERLTVLH-------PTTPSSSSIVPARKXXXXXXXX 65
           HRP+ SC  HP+  F GFCPSCL ERLT+L         T P +S   P           
Sbjct: 12  HRPANSCGCHPEEHFIGFCPSCLYERLTILKHDGSSSIDTRPITSLTSPEANCQPFTTTL 71

Query: 66  XLXXXXXXXXXXXXPELRRSKSFSASKANEALSGAFEPQRKSCDV 110
                         P+L  +KSF A K NE LS A EP+RKSCDV
Sbjct: 72  DGNHLPKSSSITFNPKLCSTKSFPALK-NEGLSCALEPRRKSCDV 115


>Glyma07g17570.1 
          Length = 238

 Score = 63.9 bits (154), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 51/99 (51%), Gaps = 6/99 (6%)

Query: 13  HRPSTSCHRHPDGQFTGFCPSCLCERLTVLHPTTPSSSSIVPARKXXXXXXXXXLXXXXX 72
           HRPSTSC+RHP+ +FTG CP CL ERL +L   + SS     +           +     
Sbjct: 4   HRPSTSCNRHPEEKFTGICPKCLYERLAILEQKSSSSKKSSSSISNAPSSSSIIV----- 58

Query: 73  XXXXXXXPELRRSKSFSASKANEALSGAFEPQRKSCDVR 111
                  P+L RS SF   K NE LS AF  QRK C+V+
Sbjct: 59  PHKPIFQPKLFRSTSFPTFK-NEGLSRAFLKQRKLCNVK 96


>Glyma02g14100.1 
          Length = 138

 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/39 (71%), Positives = 29/39 (74%)

Query: 13 HRPSTSCHRHPDGQFTGFCPSCLCERLTVLHPTTPSSSS 51
          HRPSTS  RHP   FTG CPSCLCERL VL P + SSSS
Sbjct: 15 HRPSTSYDRHPQENFTGLCPSCLCERLAVLDPNSNSSSS 53


>Glyma18g07190.1 
          Length = 503

 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 22/29 (75%), Positives = 27/29 (93%)

Query: 521 EFVLERNRSARYSPSSVDNGLLRFYLAPM 549
           +F+L+RNRS RYSPS+VDNGLLRFYL P+
Sbjct: 464 KFMLQRNRSVRYSPSNVDNGLLRFYLTPL 492


>Glyma11g23390.1 
          Length = 425

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/29 (72%), Positives = 26/29 (89%)

Query: 521 EFVLERNRSARYSPSSVDNGLLRFYLAPM 549
           +F+L+RNRS RYSPS+ DNGLLRFYL P+
Sbjct: 373 KFMLQRNRSVRYSPSNADNGLLRFYLTPL 401