Miyakogusa Predicted Gene

Lj3g3v1603950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1603950.1 Non Chatacterized Hit- tr|I3SDA2|I3SDA2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.42,0,SUBFAMILY
NOT NAMED,NULL; MACHADO-JOSEPH DISEASE PROTEIN 1 (ATAXIN-3),NULL;
JOSEPHIN,Machado-Joseph ,CUFF.42849.1
         (345 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g27200.1                                                       559   e-159
Glyma03g14740.1                                                       558   e-159
Glyma14g37110.1                                                        60   4e-09
Glyma07g17120.1                                                        59   1e-08
Glyma02g39060.1                                                        56   5e-08

>Glyma01g27200.1 
          Length = 338

 Score =  559 bits (1440), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 280/343 (81%), Positives = 302/343 (88%), Gaps = 6/343 (1%)

Query: 2   MMEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDCKERQMMMLPSL 61
           MMEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLD KERQ+M LP+L
Sbjct: 1   MMEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQVM-LPAL 59

Query: 62  ASGDFLSHDSHNVSLDGDFSIQVLQKALEVWDLQVIPLDSPVAEPAQIDPELENAFICHL 121
           AS DF   +SHNVSLDGDFSIQVLQKALEVWDLQVIPLDSPVAEPAQIDPELENAFICHL
Sbjct: 60  ASADF---ESHNVSLDGDFSIQVLQKALEVWDLQVIPLDSPVAEPAQIDPELENAFICHL 116

Query: 122 QDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYLAAYLDSLKGFGWSIFLVRGNFPKEFPIS 181
           QDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYL+AYLDSLKGFGWSIFLVRGNFPKEFPIS
Sbjct: 117 QDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFLVRGNFPKEFPIS 176

Query: 182 SSEASNGFGQWLSPEDAERIIKSCSSVQAPQRVNNERQQRQDQFLSREEADMFSEMEDED 241
           SSEASNGFGQWLSPEDAERI KSC+SVQAP    NE QQ  DQFLS  E +M  +MEDED
Sbjct: 177 SSEASNGFGQWLSPEDAERITKSCNSVQAPHPRVNEHQQHYDQFLSHGENEMLLDMEDED 236

Query: 242 LKAAIAASLMDSAPAVTNAEASSPQIGDQSSKQGATTVASPLKDQHNKTVESIEAGVVLS 301
           L+AAIAASLMDS+PAVTNAEAS+PQ  + SSKQ ATT A+PL DQH+K VE IEA   ++
Sbjct: 237 LRAAIAASLMDSSPAVTNAEASTPQNDNHSSKQVATTEATPLNDQHSKQVEPIEATPPVN 296

Query: 302 DQSNKHGASMEAASSLQIDQNNQEVASTVGDSPQDENKNKENT 344
             SNKH  ++EA S    DQN++EVAST+GD+ QDEN+NKE T
Sbjct: 297 ALSNKHVPAIEACS--LNDQNSKEVASTIGDNAQDENQNKEKT 337


>Glyma03g14740.1 
          Length = 336

 Score =  558 bits (1437), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 278/341 (81%), Positives = 301/341 (88%), Gaps = 5/341 (1%)

Query: 1   MMMEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDCKERQMMMLPS 60
           MM EGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLD KERQ+M LP+
Sbjct: 1   MMGEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQVM-LPA 59

Query: 61  LASGDFLSHDSHNVSLDGDFSIQVLQKALEVWDLQVIPLDSPVAEPAQIDPELENAFICH 120
           L+S DF   +SHNVSLDGDFSIQVLQKALEVWDLQVIPLDSPVAEPAQIDPELENAFICH
Sbjct: 60  LSSADF---ESHNVSLDGDFSIQVLQKALEVWDLQVIPLDSPVAEPAQIDPELENAFICH 116

Query: 121 LQDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYLAAYLDSLKGFGWSIFLVRGNFPKEFPI 180
           LQDHWFCIRKVN EWYNFDSLYAAPQHLSKFYL+AYLDSLKGFGWSIFLVRGNFPKEFPI
Sbjct: 117 LQDHWFCIRKVNREWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFLVRGNFPKEFPI 176

Query: 181 SSSEASNGFGQWLSPEDAERIIKSCSSVQAPQRVNNERQQRQDQFLSREEADMFSEMEDE 240
           SSSEASNGFGQWLSPEDAERI KSC+SVQAP +  NERQQ  DQFLS  E +M  +MEDE
Sbjct: 177 SSSEASNGFGQWLSPEDAERITKSCNSVQAPHQRVNERQQNYDQFLSHGETEMLLDMEDE 236

Query: 241 DLKAAIAASLMDSAPAVTNAEASSPQIGDQSSKQGATTVASPLKDQHNKTVESIEAGVVL 300
           DL+AAIAASLMDS+P VTNAEAS+PQ  +QSSKQ ATT A+PL DQH+K VE IEA   L
Sbjct: 237 DLRAAIAASLMDSSPVVTNAEASTPQNDNQSSKQVATTEATPLNDQHSKQVEPIEATPPL 296

Query: 301 SDQSNKHGASMEAASSLQIDQNNQEVASTVGDSPQDENKNK 341
           + QSNKH  + EA S L  DQN++EVAST+GD+ QD+N+ K
Sbjct: 297 NAQSNKHLPATEAGSPLN-DQNSKEVASTIGDNAQDDNQKK 336


>Glyma14g37110.1 
          Length = 332

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 19/179 (10%)

Query: 6   ASNGGMLYHEVQESKLCAVHCVNTVLQGP-FFSEFDLAALASDLDCKERQMMMLPSLASG 64
           A+    +YHE Q  + C VH +N++ Q    F+   L A++  L  ++        L+  
Sbjct: 2   ATENSQVYHERQRLQFCLVHSLNSLFQQKDAFTRAKLNAISERLALEDSNSETWTPLS-- 59

Query: 65  DFLSHDSHNVSLDGDFSIQVLQKALE------VWD-----LQVIPLDSP--VAEPAQIDP 111
             L    HNV L G++ I VL  ALE      +W         I +D+P  V     I+ 
Sbjct: 60  -VLFKPHHNV-LTGNYDINVLIAALEEKGKSVLWHDHRKGASSIDVDAPEDVLMGVVINV 117

Query: 112 ELENAFICHLQDHWFCIRKVNGEWYNFDSLYAAPQ-HLSKFYLAAYLDSLKGFGWSIFL 169
            L+         HW  +RK++G WYN DS  AAPQ  L  + +  +LDS    G  I  
Sbjct: 118 ALKRFAGIWRSRHWIALRKIDGVWYNLDSDLAAPQPFLDTYKVREFLDSTLVHGGEILF 176


>Glyma07g17120.1 
          Length = 66

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 31/41 (75%), Gaps = 4/41 (9%)

Query: 11 MLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDCK 51
          MLYH V +SKLCAVHC N      FFSEFDLAALA D+DC+
Sbjct: 1  MLYHVVPKSKLCAVHCANI----KFFSEFDLAALAFDVDCR 37


>Glyma02g39060.1 
          Length = 313

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 18/155 (11%)

Query: 6   ASNGGMLYHEVQESKLCAVHCVNTVLQGP-FFSEFDLAALASDLDCKERQMMMLPSLASG 64
           A+    +YHE Q  + C VH +N++ Q    F+   L A++  L  ++        L+  
Sbjct: 2   ATENSQVYHERQRLQFCLVHALNSLFQQKDAFTRAKLNAISERLTLEDSNSETWTPLS-- 59

Query: 65  DFLSHDSHNVSLDGDFSIQVLQKALE------VWD-----LQVIPLDSP--VAEPAQIDP 111
             L    HNV L G++ I VL  ALE      VW         I +D+P  V     I+ 
Sbjct: 60  -VLFKPHHNV-LTGNYDINVLIAALEEKGKTVVWHDRRKGASSIDVDAPEDVLMGFVINV 117

Query: 112 ELENAFICHLQDHWFCIRKVNGEWYNFDSLYAAPQ 146
            +          HW  +RK++G WYN DS   APQ
Sbjct: 118 AVTRFAGIWRSRHWIALRKIDGVWYNLDSDLTAPQ 152