Miyakogusa Predicted Gene

Lj3g3v1541350.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1541350.1 Non Chatacterized Hit- tr|K4CX67|K4CX67_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,49.41,0.00000000000003,no description,NULL; P21-Rho-binding
domain,PAK-box/P21-Rho-binding; seg,NULL;
PBD,PAK-box/P21-Rho-b,gene.g47605.t1.1
         (141 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g39730.1                                                       153   7e-38
Glyma20g28000.1                                                       151   3e-37
Glyma13g18720.1                                                        72   2e-13
Glyma10g04460.1                                                        59   1e-09
Glyma02g00660.1                                                        58   3e-09
Glyma10g00700.1                                                        50   1e-06

>Glyma10g39730.1 
          Length = 186

 Score =  153 bits (386), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 74/137 (54%), Positives = 88/137 (64%)

Query: 3   LAVVKEREMDIGYPTDVKHVAHIGWDGPTGSGPSWMNEFKTAPDFSTSIGSLSERRDPNA 62
           + VVKEREM+IGYPTDVKHVAHIGWDGP+G+GPSWMN+FKTAPDFSTS+G+L E  DPNA
Sbjct: 18  IFVVKEREMEIGYPTDVKHVAHIGWDGPSGTGPSWMNDFKTAPDFSTSLGNLGELSDPNA 77

Query: 63  STITSSRSVQDFGATSGSQPKPNLYQGISSAGVSHVHXXXXXXXXXXXXXXXXXXXXXXX 122
             +T+S S QDF  ++GSQP  N+Y+GI SAGVSH                         
Sbjct: 78  MAVTTSWSSQDFEVSTGSQPTSNIYKGIPSAGVSHAPKKSKKKKTKSASPSELVSASSRH 137

Query: 123 XXXXXXXXXYCEREAAP 139
                    Y +REA P
Sbjct: 138 SRATKSKATYSDREATP 154


>Glyma20g28000.1 
          Length = 156

 Score =  151 bits (381), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 73/139 (52%), Positives = 89/139 (64%)

Query: 3   LAVVKEREMDIGYPTDVKHVAHIGWDGPTGSGPSWMNEFKTAPDFSTSIGSLSERRDPNA 62
           + V+KEREM+IGYPTDVKHVAHIGWDGP+G+GPSWMN+FKTAPDFSTS+G+L E  DPN 
Sbjct: 18  IFVLKEREMEIGYPTDVKHVAHIGWDGPSGTGPSWMNDFKTAPDFSTSLGNLGELNDPNG 77

Query: 63  STITSSRSVQDFGATSGSQPKPNLYQGISSAGVSHVHXXXXXXXXXXXXXXXXXXXXXXX 122
             +T+S S QDF  ++GSQP  N+Y+GI SAGVSH                         
Sbjct: 78  MAVTASWSSQDFEESTGSQPASNIYKGIPSAGVSHASKKSKKKKTKSPSSSESLSASSRH 137

Query: 123 XXXXXXXXXYCEREAAPIA 141
                    Y +REA PI+
Sbjct: 138 SRATKSKAAYSDREATPIS 156


>Glyma13g18720.1 
          Length = 194

 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 3/77 (3%)

Query: 1  MVLAVVKEREMDIGYPTDVKHVAHIGWDGPTGSGPSWMNEFKTAPDFSTSIGSLSERRDP 60
           +    KE+++ IG+PTDV+HV HIGWDGP+ + PSWM++FKTAP FS++   +  +   
Sbjct: 15 QLFETEKEQDIQIGFPTDVEHVTHIGWDGPSVNYPSWMSQFKTAPGFSSAPLDVQNKGQD 74

Query: 61 NASTITSS---RSVQDF 74
          NA  ++     RS +D 
Sbjct: 75 NAKWVSEDSRRRSTRDL 91


>Glyma10g04460.1 
          Length = 206

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 5/86 (5%)

Query: 1   MVLAVVKEREMDIGYPTDVKHVAHIG--WDGPTGSGPSWMNEFKTAPDFSTSIGSLSERR 58
            +    KE+E+ IG+PTDV+HVAHIG   D  + + PSWM EFKTAP FS+    +  + 
Sbjct: 18  QIFENEKEQEIQIGFPTDVEHVAHIGSMRDESSVNLPSWMKEFKTAPGFSSVPLDVQNKG 77

Query: 59  DPNASTITSS---RSVQDFGATSGSQ 81
             +A  ++     R+ +D G  S  Q
Sbjct: 78  QHSAKWVSEESRRRNTRDLGKASKRQ 103


>Glyma02g00660.1 
          Length = 209

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 24/36 (66%), Positives = 27/36 (75%)

Query: 7  KEREMDIGYPTDVKHVAHIGWDGPTGSGPSWMNEFK 42
          KE E  IG PTDVKHVAHIG D P+ + PSWM +FK
Sbjct: 22 KEEEFQIGLPTDVKHVAHIGSDDPSANAPSWMTDFK 57


>Glyma10g00700.1 
          Length = 165

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/32 (62%), Positives = 24/32 (75%)

Query: 7  KEREMDIGYPTDVKHVAHIGWDGPTGSGPSWM 38
          KE E  IG PTDV+HVAHIG D P+ + PSW+
Sbjct: 48 KEEEFQIGLPTDVRHVAHIGSDDPSANAPSWV 79