Miyakogusa Predicted Gene

Lj3g3v1541250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1541250.1 Non Chatacterized Hit- tr|I1JKM9|I1JKM9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4975
PE=,84.96,0,RING/U-box,NULL; ZF_RING_1,Zinc finger, RING-type,
conserved site; ZF_RING_2,Zinc finger,
RING-type;,NODE_48212_length_1264_cov_72.564873.path2.1
         (114 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g02920.1                                                       214   2e-56
Glyma08g39400.1                                                       207   2e-54
Glyma05g37520.2                                                       201   1e-52
Glyma05g37520.1                                                       201   1e-52

>Glyma03g02920.1 
          Length = 330

 Score =  214 bits (544), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 97/113 (85%), Positives = 106/113 (93%), Gaps = 1/113 (0%)

Query: 1   MHDRGDYKSGWQLEKDWDDAEKARKMRLAAGEDA-VEEGANVTDEEDDDSLPFACFICRQ 59
           MHDRGDYKSGWQ+EK+W++AEK RKMRLAAGEDA  EEGAN+TDE+D+DSLPFACFICR 
Sbjct: 216 MHDRGDYKSGWQMEKEWEEAEKQRKMRLAAGEDADEEEGANLTDEDDEDSLPFACFICRN 275

Query: 60  PFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGTFNVAQEIRKKMAED 112
            FVDPVVTKCKHYFCEHCALKHH+KNKKCFVCNQPTLG FNVA EIR+KMAED
Sbjct: 276 SFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNQPTLGIFNVAHEIRRKMAED 328


>Glyma08g39400.1 
          Length = 295

 Score =  207 bits (526), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 95/113 (84%), Positives = 105/113 (92%), Gaps = 1/113 (0%)

Query: 1   MHDRGDYKSGWQLEKDWDDAEKARKMRLAAGEDA-VEEGANVTDEEDDDSLPFACFICRQ 59
           MHD+GDYKSGWQ+EK+W++ EKARKM+LAAGEDA  EEGAN+TDE++D SLPFACFICR 
Sbjct: 182 MHDQGDYKSGWQMEKEWEEVEKARKMKLAAGEDADEEEGANLTDEDEDGSLPFACFICRN 241

Query: 60  PFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGTFNVAQEIRKKMAED 112
           PFVDPVVTKCK YFCEHCALKHHAKNKKCFVCNQPTLG FNVA EIR+KMAED
Sbjct: 242 PFVDPVVTKCKRYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRRKMAED 294


>Glyma05g37520.2 
          Length = 329

 Score =  201 bits (511), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 99/112 (88%), Positives = 107/112 (95%)

Query: 1   MHDRGDYKSGWQLEKDWDDAEKARKMRLAAGEDAVEEGANVTDEEDDDSLPFACFICRQP 60
           MHDRGDYKSGWQ+EK+W++AEKARKMRLAAGEDA EEGAN+TDE+D+DSLPFACFICR  
Sbjct: 216 MHDRGDYKSGWQMEKEWEEAEKARKMRLAAGEDADEEGANLTDEDDEDSLPFACFICRNT 275

Query: 61  FVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGTFNVAQEIRKKMAED 112
           FVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLG FNVA EIR+KMAED
Sbjct: 276 FVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRRKMAED 327


>Glyma05g37520.1 
          Length = 329

 Score =  201 bits (511), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 99/112 (88%), Positives = 107/112 (95%)

Query: 1   MHDRGDYKSGWQLEKDWDDAEKARKMRLAAGEDAVEEGANVTDEEDDDSLPFACFICRQP 60
           MHDRGDYKSGWQ+EK+W++AEKARKMRLAAGEDA EEGAN+TDE+D+DSLPFACFICR  
Sbjct: 216 MHDRGDYKSGWQMEKEWEEAEKARKMRLAAGEDADEEGANLTDEDDEDSLPFACFICRNT 275

Query: 61  FVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGTFNVAQEIRKKMAED 112
           FVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLG FNVA EIR+KMAED
Sbjct: 276 FVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRRKMAED 327