Miyakogusa Predicted Gene

Lj3g3v1528000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1528000.1 Non Chatacterized Hit- tr|G7JV99|G7JV99_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,55.79,9e-19,
,CUFF.42799.1
         (103 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g08340.1                                                        84   3e-17
Glyma17g12650.1                                                        73   8e-14

>Glyma05g08340.1 
          Length = 327

 Score = 84.0 bits (206), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/61 (68%), Positives = 48/61 (78%)

Query: 43  MESESSYTCKELLDQSHETFRSSHDKRESMSDRSRYVQDRVDYGDHHHLANDLSEGENEF 102
           MESESS+  ++LLD  HETFRSSHDKRE  SDRS+Y  D V+Y DH HLA+DLS  ENEF
Sbjct: 1   MESESSFLREQLLDGGHETFRSSHDKREGGSDRSQYNNDTVNYDDHRHLADDLSAHENEF 60

Query: 103 N 103
           N
Sbjct: 61  N 61


>Glyma17g12650.1 
          Length = 323

 Score = 72.8 bits (177), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 37/59 (62%), Positives = 46/59 (77%)

Query: 43  MESESSYTCKELLDQSHETFRSSHDKRESMSDRSRYVQDRVDYGDHHHLANDLSEGENE 101
           MESESS+  ++LLD  HETFRS+H KRE  S+RS+Y  D V+Y D+HHLA+DLS  ENE
Sbjct: 1   MESESSFLREQLLDGGHETFRSAHYKREGGSNRSQYNDDTVNYDDNHHLADDLSAHENE 59