Miyakogusa Predicted Gene

Lj3g3v1476940.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1476940.1 Non Chatacterized Hit- tr|B9T439|B9T439_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,29.49,2e-17,seg,NULL,CUFF.42675.1
         (300 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g17230.1                                                       208   7e-54
Glyma03g33120.1                                                        55   1e-07

>Glyma01g17230.1 
          Length = 238

 Score =  208 bits (529), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 114/205 (55%), Positives = 143/205 (69%), Gaps = 16/205 (7%)

Query: 94  PEAKSSHIFNTLRKLPSFATITAASA-FLILGFCQKGFTSKALPSSLSSVVSIQEELLDE 152
           P+ KS   FN LRK+PSF T+TAASA FL LGFC+ GF  K    SLSSVVSIQE L   
Sbjct: 46  PDPKSLQFFNPLRKVPSFVTVTAASAAFLFLGFCRNGFIKK----SLSSVVSIQEGL--- 98

Query: 153 KTDIGDFLGSKPDHGHSVLLLKLKERVPVVHSFDKMKSDDEEAWQVLKAQVFSCSEKLEL 212
                D  G   +    VL LKLK+RVP+VH F K +  DEEAWQVLKA+VF+ SE+ E 
Sbjct: 99  -----DGKGMLEEEEPVVLHLKLKKRVPIVHDFKKTRIADEEAWQVLKAEVFNSSERFEF 153

Query: 213 VKVGFEEILENDQDCHRAHHDCIFEYLEMVDKCTNLLKGIKVAISRCERQNADIRSYLRF 272
            KV FEE+LE ++   +A HDC+ E+LE +D+C  LLK IKVA+ RCE++N +++  LRF
Sbjct: 154 AKVRFEEMLEKER---KAFHDCVLEHLERIDECKTLLKEIKVAMDRCEKKNTNLKCSLRF 210

Query: 273 FSKVLARIRVFERDMVGALKYYKEL 297
           FSKV+A +RV E +M+ ALKYYKEL
Sbjct: 211 FSKVVAHVRVLEANMLHALKYYKEL 235


>Glyma03g33120.1 
          Length = 286

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 2/109 (1%)

Query: 192 DEEAWQVLKAQVFSCSEKLELVKVGFEEILENDQDCHRAHHDCIFEYLEMVDKCTNLLKG 251
           +E+ W +LKA +   ++        FEEIL+ D     A H  +    +  +   +LLK 
Sbjct: 112 EEQEWPLLKANMHIYNDDHAPACKLFEEILKKDPLRVEAFHGLVMATAQSNEPLKSLLKR 171

Query: 252 IKVAISRCERQNADIRSYLRFFSKVLARIRVFERDMVGALKYYKELVQE 300
           ++ AI  C++Q  D  S +R F  ++A+I+V E D   ALK Y+ELV+E
Sbjct: 172 VEEAIEVCKKQKKD--SDVRDFRLLIAQIKVMEGDYTEALKAYQELVKE 218